Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB18PQ96TA0 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB18PQ96TA0 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.71■■□□□ 1.55
PCDHB18PQ96TA0 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC24.71■■□□□ 1.55
PCDHB18PQ96TA0 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB18PQ96TA0 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB18PQ96TA0 ABCB10P4-201ENST00000566803 2184 ntBASIC24.71■■□□□ 1.55
PCDHB18PQ96TA0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB18PQ96TA0 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC24.71■■□□□ 1.55
PCDHB18PQ96TA0 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC24.71■■□□□ 1.55
PCDHB18PQ96TA0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.55
PCDHB18PQ96TA0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB18PQ96TA0 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHB18PQ96TA0 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
PCDHB18PQ96TA0 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC24.7■■□□□ 1.54
PCDHB18PQ96TA0 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC24.7■■□□□ 1.54
PCDHB18PQ96TA0 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB18PQ96TA0 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB18PQ96TA0 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC24.69■■□□□ 1.54
PCDHB18PQ96TA0 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC24.69■■□□□ 1.54
PCDHB18PQ96TA0 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
PCDHB18PQ96TA0 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC24.69■■□□□ 1.54
PCDHB18PQ96TA0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 SSSCA1-AS1-201ENST00000567594 614 ntBASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 PVT1_1.1-201ENST00000615125 194 ntBASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC24.68■■□□□ 1.54
PCDHB18PQ96TA0 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB18PQ96TA0 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC24.67■■□□□ 1.54
PCDHB18PQ96TA0 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB18PQ96TA0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB18PQ96TA0 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB18PQ96TA0 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC24.67■■□□□ 1.54
PCDHB18PQ96TA0 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB18PQ96TA0 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
PCDHB18PQ96TA0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB18PQ96TA0 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.66■■□□□ 1.54
PCDHB18PQ96TA0 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC24.66■■□□□ 1.54
PCDHB18PQ96TA0 AC019171.1-201ENST00000601251 1056 ntBASIC24.66■■□□□ 1.54
PCDHB18PQ96TA0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC24.66■■□□□ 1.54
PCDHB18PQ96TA0 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB18PQ96TA0 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC24.66■■□□□ 1.54
PCDHB18PQ96TA0 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
PCDHB18PQ96TA0 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
PCDHB18PQ96TA0 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC24.66■■□□□ 1.54
PCDHB18PQ96TA0 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB18PQ96TA0 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB18PQ96TA0 AC139795.1-202ENST00000500444 432 ntBASIC24.65■■□□□ 1.54
PCDHB18PQ96TA0 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
PCDHB18PQ96TA0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.65■■□□□ 1.54
PCDHB18PQ96TA0 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
PCDHB18PQ96TA0 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC24.64■■□□□ 1.54
PCDHB18PQ96TA0 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC24.64■■□□□ 1.53
PCDHB18PQ96TA0 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.53
PCDHB18PQ96TA0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB18PQ96TA0 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB18PQ96TA0 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
PCDHB18PQ96TA0 MTX2-204ENST00000443241 799 ntTSL 3 BASIC24.63■■□□□ 1.53
PCDHB18PQ96TA0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC24.63■■□□□ 1.53
PCDHB18PQ96TA0 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB18PQ96TA0 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB18PQ96TA0 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC24.63■■□□□ 1.53
PCDHB18PQ96TA0 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
PCDHB18PQ96TA0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 TSPY13P-201ENST00000338964 914 ntBASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 IDNK-201ENST00000376417 511 ntTSL 5 BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
PCDHB18PQ96TA0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
PCDHB18PQ96TA0 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB18PQ96TA0 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC24.61■■□□□ 1.53
PCDHB18PQ96TA0 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
PCDHB18PQ96TA0 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB18PQ96TA0 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB18PQ96TA0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB18PQ96TA0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB18PQ96TA0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB18PQ96TA0 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB18PQ96TA0 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
PCDHB18PQ96TA0 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB18PQ96TA0 GUK1-208ENST00000366728 842 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHB18PQ96TA0 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.59■■□□□ 1.53
PCDHB18PQ96TA0 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
PCDHB18PQ96TA0 AC010980.1-201ENST00000587192 1142 ntBASIC24.59■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms