Protein–RNA interactions for Protein: Q96RK1

CITED4, Cbp/p300-interacting transactivator 4, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CITED4Q96RK1 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CITED4Q96RK1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CITED4Q96RK1 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CITED4Q96RK1 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.67■□□□□ 0.74
CITED4Q96RK1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CITED4Q96RK1 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CITED4Q96RK1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
CITED4Q96RK1 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CITED4Q96RK1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
CITED4Q96RK1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CITED4Q96RK1 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CITED4Q96RK1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CITED4Q96RK1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC19.66■□□□□ 0.74
CITED4Q96RK1 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CITED4Q96RK1 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC19.66■□□□□ 0.74
CITED4Q96RK1 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CITED4Q96RK1 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CITED4Q96RK1 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CITED4Q96RK1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
CITED4Q96RK1 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC19.66■□□□□ 0.74
CITED4Q96RK1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC19.66■□□□□ 0.74
CITED4Q96RK1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.66■□□□□ 0.74
CITED4Q96RK1 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
CITED4Q96RK1 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CITED4Q96RK1 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.65■□□□□ 0.74
CITED4Q96RK1 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CITED4Q96RK1 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
CITED4Q96RK1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.65■□□□□ 0.74
CITED4Q96RK1 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CITED4Q96RK1 DUX4L29-201ENST00000425409 679 ntBASIC19.65■□□□□ 0.74
CITED4Q96RK1 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CITED4Q96RK1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CITED4Q96RK1 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
CITED4Q96RK1 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CITED4Q96RK1 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
CITED4Q96RK1 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CITED4Q96RK1 WHAMMP2-203ENST00000563942 1603 ntBASIC19.65■□□□□ 0.74
CITED4Q96RK1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.64■□□□□ 0.74
CITED4Q96RK1 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CITED4Q96RK1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CITED4Q96RK1 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.74
CITED4Q96RK1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CITED4Q96RK1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CITED4Q96RK1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
CITED4Q96RK1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CITED4Q96RK1 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.64■□□□□ 0.73
CITED4Q96RK1 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CITED4Q96RK1 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
CITED4Q96RK1 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.63■□□□□ 0.73
CITED4Q96RK1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.63■□□□□ 0.73
CITED4Q96RK1 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CITED4Q96RK1 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC19.63■□□□□ 0.73
CITED4Q96RK1 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CITED4Q96RK1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CITED4Q96RK1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
CITED4Q96RK1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CITED4Q96RK1 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
CITED4Q96RK1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CITED4Q96RK1 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CITED4Q96RK1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CITED4Q96RK1 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CITED4Q96RK1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CITED4Q96RK1 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CITED4Q96RK1 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC19.62■□□□□ 0.73
CITED4Q96RK1 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC19.62■□□□□ 0.73
CITED4Q96RK1 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CITED4Q96RK1 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CITED4Q96RK1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC19.62■□□□□ 0.73
CITED4Q96RK1 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CITED4Q96RK1 AL391422.3-201ENST00000603791 2761 ntBASIC19.61■□□□□ 0.73
CITED4Q96RK1 AC010501.1-201ENST00000606270 1962 ntBASIC19.61■□□□□ 0.73
CITED4Q96RK1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CITED4Q96RK1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CITED4Q96RK1 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CITED4Q96RK1 MIR4449-201ENST00000578365 66 ntBASIC19.61■□□□□ 0.73
CITED4Q96RK1 MIR6090-201ENST00000622481 60 ntBASIC19.61■□□□□ 0.73
CITED4Q96RK1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
CITED4Q96RK1 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CITED4Q96RK1 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CITED4Q96RK1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CITED4Q96RK1 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CITED4Q96RK1 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC19.6■□□□□ 0.73
CITED4Q96RK1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.6■□□□□ 0.73
CITED4Q96RK1 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CITED4Q96RK1 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CITED4Q96RK1 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CITED4Q96RK1 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
CITED4Q96RK1 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CITED4Q96RK1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
CITED4Q96RK1 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CITED4Q96RK1 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC19.59■□□□□ 0.73
CITED4Q96RK1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CITED4Q96RK1 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
CITED4Q96RK1 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
CITED4Q96RK1 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CITED4Q96RK1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
CITED4Q96RK1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CITED4Q96RK1 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CITED4Q96RK1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
CITED4Q96RK1 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms