Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.57■■■□□ 2
NEK1Q96PY6 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.56■■■□□ 2
NEK1Q96PY6 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.56■■■□□ 2
NEK1Q96PY6 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC27.56■■■□□ 2
NEK1Q96PY6 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
NEK1Q96PY6 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC27.56■■■□□ 2
NEK1Q96PY6 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.56■■■□□ 2
NEK1Q96PY6 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC27.55■■■□□ 2
NEK1Q96PY6 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC27.55■■■□□ 2
NEK1Q96PY6 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
NEK1Q96PY6 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC27.55■■■□□ 2
NEK1Q96PY6 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
NEK1Q96PY6 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
NEK1Q96PY6 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC27.54■■■□□ 2
NEK1Q96PY6 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC27.54■■■□□ 2
NEK1Q96PY6 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC27.54■■■□□ 2
NEK1Q96PY6 AC011551.1-201ENST00000614101 683 ntBASIC27.54■■■□□ 2
NEK1Q96PY6 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
NEK1Q96PY6 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC27.53■■■□□ 2
NEK1Q96PY6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
NEK1Q96PY6 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
NEK1Q96PY6 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC27.53■■■□□ 2
NEK1Q96PY6 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
NEK1Q96PY6 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
NEK1Q96PY6 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.52■■■□□ 2
NEK1Q96PY6 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
NEK1Q96PY6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC27.52■■■□□ 2
NEK1Q96PY6 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.52■■■□□ 2
NEK1Q96PY6 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
NEK1Q96PY6 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
NEK1Q96PY6 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC27.52■■■□□ 2
NEK1Q96PY6 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC27.52■■■□□ 2
NEK1Q96PY6 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC27.52■■■□□ 2
NEK1Q96PY6 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC27.51■■□□□ 1.99
NEK1Q96PY6 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
NEK1Q96PY6 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
NEK1Q96PY6 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.5■■□□□ 1.99
NEK1Q96PY6 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
NEK1Q96PY6 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.5■■□□□ 1.99
NEK1Q96PY6 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC27.5■■□□□ 1.99
NEK1Q96PY6 AC004812.2-201ENST00000611079 2094 ntBASIC27.5■■□□□ 1.99
NEK1Q96PY6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
NEK1Q96PY6 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC27.49■■□□□ 1.99
NEK1Q96PY6 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.49■■□□□ 1.99
NEK1Q96PY6 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
NEK1Q96PY6 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.49■■□□□ 1.99
NEK1Q96PY6 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC27.49■■□□□ 1.99
NEK1Q96PY6 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC27.49■■□□□ 1.99
NEK1Q96PY6 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC27.48■■□□□ 1.99
NEK1Q96PY6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC27.48■■□□□ 1.99
NEK1Q96PY6 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.48■■□□□ 1.99
NEK1Q96PY6 AC120024.1-201ENST00000562672 995 ntBASIC27.48■■□□□ 1.99
NEK1Q96PY6 MIR4508-201ENST00000584178 70 ntBASIC27.48■■□□□ 1.99
NEK1Q96PY6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC27.48■■□□□ 1.99
NEK1Q96PY6 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
NEK1Q96PY6 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
NEK1Q96PY6 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
NEK1Q96PY6 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
NEK1Q96PY6 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
NEK1Q96PY6 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
NEK1Q96PY6 AC103834.1-201ENST00000520383 144 ntBASIC27.47■■□□□ 1.99
NEK1Q96PY6 GAK-223ENST00000628912 497 ntTSL 5 BASIC27.47■■□□□ 1.99
NEK1Q96PY6 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC27.47■■□□□ 1.99
NEK1Q96PY6 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC27.47■■□□□ 1.99
NEK1Q96PY6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
NEK1Q96PY6 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
NEK1Q96PY6 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC27.46■■□□□ 1.99
NEK1Q96PY6 KRT18P24-201ENST00000344739 1156 ntBASIC27.46■■□□□ 1.99
NEK1Q96PY6 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
NEK1Q96PY6 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC27.46■■□□□ 1.99
NEK1Q96PY6 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
NEK1Q96PY6 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC27.45■■□□□ 1.99
NEK1Q96PY6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
NEK1Q96PY6 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC27.45■■□□□ 1.98
NEK1Q96PY6 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
NEK1Q96PY6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
NEK1Q96PY6 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC27.45■■□□□ 1.98
NEK1Q96PY6 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
NEK1Q96PY6 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC27.45■■□□□ 1.98
NEK1Q96PY6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC27.45■■□□□ 1.98
NEK1Q96PY6 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
NEK1Q96PY6 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC27.44■■□□□ 1.98
NEK1Q96PY6 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.44■■□□□ 1.98
NEK1Q96PY6 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
NEK1Q96PY6 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC27.44■■□□□ 1.98
NEK1Q96PY6 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC27.44■■□□□ 1.98
NEK1Q96PY6 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC27.44■■□□□ 1.98
NEK1Q96PY6 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC27.44■■□□□ 1.98
NEK1Q96PY6 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
NEK1Q96PY6 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NEK1Q96PY6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
NEK1Q96PY6 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC27.43■■□□□ 1.98
NEK1Q96PY6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
NEK1Q96PY6 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC27.43■■□□□ 1.98
NEK1Q96PY6 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NEK1Q96PY6 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
NEK1Q96PY6 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC27.43■■□□□ 1.98
NEK1Q96PY6 SHD-204ENST00000599689 1729 ntTSL 5 BASIC27.42■■□□□ 1.98
NEK1Q96PY6 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
NEK1Q96PY6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Retrieved 100 of 98,524 protein–RNA pairs in 11.7 ms