Protein–RNA interactions for Protein: Q96MT3

PRICKLE1, Prickle-like protein 1, humanhuman

Predicted RBP Predictions only

Length 831 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRICKLE1Q96MT3 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC24.04■■□□□ 1.44
PRICKLE1Q96MT3 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.03■■□□□ 1.44
PRICKLE1Q96MT3 UNC93B8-201ENST00000511903 705 ntBASIC24.03■■□□□ 1.44
PRICKLE1Q96MT3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
PRICKLE1Q96MT3 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
PRICKLE1Q96MT3 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.02■■□□□ 1.44
PRICKLE1Q96MT3 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
PRICKLE1Q96MT3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC24.02■■□□□ 1.44
PRICKLE1Q96MT3 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
PRICKLE1Q96MT3 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC24.02■■□□□ 1.43
PRICKLE1Q96MT3 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PRICKLE1Q96MT3 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.01■■□□□ 1.43
PRICKLE1Q96MT3 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC24.01■■□□□ 1.43
PRICKLE1Q96MT3 AL356441.2-201ENST00000443009 864 ntBASIC24.01■■□□□ 1.43
PRICKLE1Q96MT3 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
PRICKLE1Q96MT3 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
PRICKLE1Q96MT3 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC24.01■■□□□ 1.43
PRICKLE1Q96MT3 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PRICKLE1Q96MT3 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC24.01■■□□□ 1.43
PRICKLE1Q96MT3 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PRICKLE1Q96MT3 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
PRICKLE1Q96MT3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24■■□□□ 1.43
PRICKLE1Q96MT3 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PRICKLE1Q96MT3 AC092028.1-203ENST00000608262 953 ntBASIC24■■□□□ 1.43
PRICKLE1Q96MT3 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
PRICKLE1Q96MT3 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
PRICKLE1Q96MT3 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC24■■□□□ 1.43
PRICKLE1Q96MT3 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PRICKLE1Q96MT3 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.99■■□□□ 1.43
PRICKLE1Q96MT3 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.99■■□□□ 1.43
PRICKLE1Q96MT3 TSPY9P-201ENST00000440215 945 ntBASIC23.99■■□□□ 1.43
PRICKLE1Q96MT3 TSPY11P-201ENST00000442607 1045 ntBASIC23.99■■□□□ 1.43
PRICKLE1Q96MT3 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.99■■□□□ 1.43
PRICKLE1Q96MT3 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC23.99■■□□□ 1.43
PRICKLE1Q96MT3 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PRICKLE1Q96MT3 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
PRICKLE1Q96MT3 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PRICKLE1Q96MT3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PRICKLE1Q96MT3 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
PRICKLE1Q96MT3 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PRICKLE1Q96MT3 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.98■■□□□ 1.43
PRICKLE1Q96MT3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
PRICKLE1Q96MT3 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.98■■□□□ 1.43
PRICKLE1Q96MT3 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.98■■□□□ 1.43
PRICKLE1Q96MT3 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
PRICKLE1Q96MT3 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
PRICKLE1Q96MT3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
PRICKLE1Q96MT3 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.97■■□□□ 1.43
PRICKLE1Q96MT3 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
PRICKLE1Q96MT3 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.97■■□□□ 1.43
PRICKLE1Q96MT3 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.97■■□□□ 1.43
PRICKLE1Q96MT3 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.97■■□□□ 1.43
PRICKLE1Q96MT3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
PRICKLE1Q96MT3 LTK-203ENST00000453182 2412 ntTSL 2 BASIC23.96■■□□□ 1.43
PRICKLE1Q96MT3 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC23.96■■□□□ 1.43
PRICKLE1Q96MT3 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC23.96■■□□□ 1.43
PRICKLE1Q96MT3 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
PRICKLE1Q96MT3 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
PRICKLE1Q96MT3 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.96■■□□□ 1.43
PRICKLE1Q96MT3 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.96■■□□□ 1.43
PRICKLE1Q96MT3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.95■■□□□ 1.43
PRICKLE1Q96MT3 AC022211.4-201ENST00000625094 2161 ntBASIC23.95■■□□□ 1.42
PRICKLE1Q96MT3 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
PRICKLE1Q96MT3 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PRICKLE1Q96MT3 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.95■■□□□ 1.42
PRICKLE1Q96MT3 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC23.95■■□□□ 1.42
PRICKLE1Q96MT3 GRAMD4P7-201ENST00000578182 1232 ntBASIC23.95■■□□□ 1.42
PRICKLE1Q96MT3 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC23.95■■□□□ 1.42
PRICKLE1Q96MT3 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
PRICKLE1Q96MT3 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.95■■□□□ 1.42
PRICKLE1Q96MT3 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.95■■□□□ 1.42
PRICKLE1Q96MT3 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
PRICKLE1Q96MT3 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.94■■□□□ 1.42
PRICKLE1Q96MT3 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC23.94■■□□□ 1.42
PRICKLE1Q96MT3 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PRICKLE1Q96MT3 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC23.94■■□□□ 1.42
PRICKLE1Q96MT3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC23.94■■□□□ 1.42
PRICKLE1Q96MT3 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
PRICKLE1Q96MT3 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC23.94■■□□□ 1.42
PRICKLE1Q96MT3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PRICKLE1Q96MT3 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PRICKLE1Q96MT3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
PRICKLE1Q96MT3 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PRICKLE1Q96MT3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
PRICKLE1Q96MT3 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC23.93■■□□□ 1.42
PRICKLE1Q96MT3 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PRICKLE1Q96MT3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC23.93■■□□□ 1.42
PRICKLE1Q96MT3 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC23.93■■□□□ 1.42
PRICKLE1Q96MT3 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.93■■□□□ 1.42
PRICKLE1Q96MT3 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.93■■□□□ 1.42
PRICKLE1Q96MT3 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
PRICKLE1Q96MT3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRICKLE1Q96MT3 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.92■■□□□ 1.42
PRICKLE1Q96MT3 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRICKLE1Q96MT3 KRT16P3-201ENST00000439127 1283 ntBASIC23.92■■□□□ 1.42
PRICKLE1Q96MT3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC23.92■■□□□ 1.42
PRICKLE1Q96MT3 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC23.92■■□□□ 1.42
PRICKLE1Q96MT3 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC23.92■■□□□ 1.42
PRICKLE1Q96MT3 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
PRICKLE1Q96MT3 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms