Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 AL121603.2-201ENST00000557373 2117 ntBASIC21.24■□□□□ 0.99
COX4I2Q96KJ9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
COX4I2Q96KJ9 AL451085.2-201ENST00000605085 799 ntBASIC21.24■□□□□ 0.99
COX4I2Q96KJ9 AC129492.7-201ENST00000622992 756 ntBASIC21.24■□□□□ 0.99
COX4I2Q96KJ9 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COX4I2Q96KJ9 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
COX4I2Q96KJ9 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
COX4I2Q96KJ9 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
COX4I2Q96KJ9 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 ABCB10P4-201ENST00000566803 2184 ntBASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 AC019069.1-201ENST00000610008 1333 ntBASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 EP400NL-214ENST00000641289 2402 ntBASIC21.23■□□□□ 0.99
COX4I2Q96KJ9 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
COX4I2Q96KJ9 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
COX4I2Q96KJ9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COX4I2Q96KJ9 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.22■□□□□ 0.99
COX4I2Q96KJ9 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COX4I2Q96KJ9 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC21.22■□□□□ 0.99
COX4I2Q96KJ9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
COX4I2Q96KJ9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
COX4I2Q96KJ9 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
COX4I2Q96KJ9 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.22■□□□□ 0.99
COX4I2Q96KJ9 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
COX4I2Q96KJ9 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
COX4I2Q96KJ9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COX4I2Q96KJ9 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COX4I2Q96KJ9 AL592295.1-201ENST00000400984 884 ntBASIC21.21■□□□□ 0.99
COX4I2Q96KJ9 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC21.21■□□□□ 0.99
COX4I2Q96KJ9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COX4I2Q96KJ9 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COX4I2Q96KJ9 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.21■□□□□ 0.99
COX4I2Q96KJ9 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
COX4I2Q96KJ9 EED-207ENST00000528180 1745 ntTSL 5 BASIC21.21■□□□□ 0.99
COX4I2Q96KJ9 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
COX4I2Q96KJ9 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC21.2■□□□□ 0.99
COX4I2Q96KJ9 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COX4I2Q96KJ9 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COX4I2Q96KJ9 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COX4I2Q96KJ9 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.2■□□□□ 0.98
COX4I2Q96KJ9 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
COX4I2Q96KJ9 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.2■□□□□ 0.98
COX4I2Q96KJ9 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
COX4I2Q96KJ9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.2■□□□□ 0.98
COX4I2Q96KJ9 AC010501.1-201ENST00000606270 1962 ntBASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 DUX4L18-201ENST00000553347 1267 ntBASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.19■□□□□ 0.98
COX4I2Q96KJ9 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 MOB2-207ENST00000614710 705 ntTSL 5 BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
COX4I2Q96KJ9 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 AC007029.1-201ENST00000604183 313 ntBASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
COX4I2Q96KJ9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
COX4I2Q96KJ9 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COX4I2Q96KJ9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
COX4I2Q96KJ9 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC21.16■□□□□ 0.98
COX4I2Q96KJ9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COX4I2Q96KJ9 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms