Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMD4Q96H15 CREM-210ENST00000374721 2020 ntTSL 5 BASIC19.51■□□□□ 0.71
TIMD4Q96H15 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.51■□□□□ 0.71
TIMD4Q96H15 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.51■□□□□ 0.71
TIMD4Q96H15 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.51■□□□□ 0.71
TIMD4Q96H15 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TIMD4Q96H15 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TIMD4Q96H15 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
TIMD4Q96H15 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.5■□□□□ 0.71
TIMD4Q96H15 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TIMD4Q96H15 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC19.5■□□□□ 0.71
TIMD4Q96H15 CLTA-210ENST00000540080 989 ntTSL 2 BASIC19.5■□□□□ 0.71
TIMD4Q96H15 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TIMD4Q96H15 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
TIMD4Q96H15 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TIMD4Q96H15 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
TIMD4Q96H15 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
TIMD4Q96H15 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TIMD4Q96H15 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMD4Q96H15 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.49■□□□□ 0.71
TIMD4Q96H15 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMD4Q96H15 SLC6A10P-202ENST00000431994 2058 ntBASIC19.49■□□□□ 0.71
TIMD4Q96H15 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.49■□□□□ 0.71
TIMD4Q96H15 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.49■□□□□ 0.71
TIMD4Q96H15 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.49■□□□□ 0.71
TIMD4Q96H15 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
TIMD4Q96H15 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMD4Q96H15 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMD4Q96H15 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TIMD4Q96H15 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.48■□□□□ 0.71
TIMD4Q96H15 MIR6724-1-201ENST00000616420 92 ntBASIC19.48■□□□□ 0.71
TIMD4Q96H15 MIR6724-2-201ENST00000616483 92 ntBASIC19.48■□□□□ 0.71
TIMD4Q96H15 MIR6724-4-201ENST00000617390 92 ntBASIC19.48■□□□□ 0.71
TIMD4Q96H15 MIR6724-3-201ENST00000622482 92 ntBASIC19.48■□□□□ 0.71
TIMD4Q96H15 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TIMD4Q96H15 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.47■□□□□ 0.71
TIMD4Q96H15 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.47■□□□□ 0.71
TIMD4Q96H15 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
TIMD4Q96H15 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TIMD4Q96H15 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TIMD4Q96H15 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMD4Q96H15 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC19.46■□□□□ 0.71
TIMD4Q96H15 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMD4Q96H15 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMD4Q96H15 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
TIMD4Q96H15 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMD4Q96H15 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.46■□□□□ 0.71
TIMD4Q96H15 MIR6089-201ENST00000616698 64 ntBASIC19.46■□□□□ 0.71
TIMD4Q96H15 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TIMD4Q96H15 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC19.46■□□□□ 0.71
TIMD4Q96H15 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
TIMD4Q96H15 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TIMD4Q96H15 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC19.46■□□□□ 0.71
TIMD4Q96H15 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
TIMD4Q96H15 AC008406.3-201ENST00000620001 1374 ntBASIC19.45■□□□□ 0.7
TIMD4Q96H15 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMD4Q96H15 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TIMD4Q96H15 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC19.45■□□□□ 0.7
TIMD4Q96H15 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMD4Q96H15 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TIMD4Q96H15 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC19.45■□□□□ 0.7
TIMD4Q96H15 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
TIMD4Q96H15 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.45■□□□□ 0.7
TIMD4Q96H15 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
TIMD4Q96H15 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
TIMD4Q96H15 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMD4Q96H15 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMD4Q96H15 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMD4Q96H15 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.44■□□□□ 0.7
TIMD4Q96H15 AL356740.2-201ENST00000601559 647 ntBASIC19.44■□□□□ 0.7
TIMD4Q96H15 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMD4Q96H15 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TIMD4Q96H15 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.44■□□□□ 0.7
TIMD4Q96H15 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
TIMD4Q96H15 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMD4Q96H15 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TIMD4Q96H15 STK32C-205ENST00000456004 607 ntTSL 2 BASIC19.43■□□□□ 0.7
TIMD4Q96H15 SNX5-217ENST00000606557 1087 ntBASIC19.43■□□□□ 0.7
TIMD4Q96H15 MIR6722-201ENST00000617286 78 ntBASIC19.43■□□□□ 0.7
TIMD4Q96H15 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TIMD4Q96H15 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TIMD4Q96H15 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMD4Q96H15 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMD4Q96H15 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TIMD4Q96H15 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC19.42■□□□□ 0.7
TIMD4Q96H15 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMD4Q96H15 CD72-202ENST00000378430 585 ntTSL 3 BASIC19.42■□□□□ 0.7
TIMD4Q96H15 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TIMD4Q96H15 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC19.42■□□□□ 0.7
TIMD4Q96H15 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.42■□□□□ 0.7
TIMD4Q96H15 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC19.42■□□□□ 0.7
TIMD4Q96H15 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.42■□□□□ 0.7
TIMD4Q96H15 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.42■□□□□ 0.7
TIMD4Q96H15 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TIMD4Q96H15 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TIMD4Q96H15 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TIMD4Q96H15 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.41■□□□□ 0.7
TIMD4Q96H15 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC19.41■□□□□ 0.7
TIMD4Q96H15 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC19.41■□□□□ 0.7
TIMD4Q96H15 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 116 ms