Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.81■■□□□ 1.08
TM9SF4Q92544 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC21.81■■□□□ 1.08
TM9SF4Q92544 MTDHP2-201ENST00000601468 714 ntBASIC21.81■■□□□ 1.08
TM9SF4Q92544 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
TM9SF4Q92544 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
TM9SF4Q92544 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
TM9SF4Q92544 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
TM9SF4Q92544 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF4Q92544 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF4Q92544 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF4Q92544 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF4Q92544 AC010997.5-201ENST00000609182 354 ntBASIC21.8■■□□□ 1.08
TM9SF4Q92544 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF4Q92544 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.8■■□□□ 1.08
TM9SF4Q92544 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.8■■□□□ 1.08
TM9SF4Q92544 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF4Q92544 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF4Q92544 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
TM9SF4Q92544 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF4Q92544 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF4Q92544 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF4Q92544 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF4Q92544 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC21.79■■□□□ 1.08
TM9SF4Q92544 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC21.79■■□□□ 1.08
TM9SF4Q92544 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC21.79■■□□□ 1.08
TM9SF4Q92544 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC21.79■■□□□ 1.08
TM9SF4Q92544 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF4Q92544 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF4Q92544 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF4Q92544 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.79■■□□□ 1.08
TM9SF4Q92544 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF4Q92544 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF4Q92544 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF4Q92544 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.79■■□□□ 1.08
TM9SF4Q92544 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
TM9SF4Q92544 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC21.78■■□□□ 1.08
TM9SF4Q92544 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.78■■□□□ 1.08
TM9SF4Q92544 SRR-208ENST00000576848 588 ntTSL 4 BASIC21.78■■□□□ 1.08
TM9SF4Q92544 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
TM9SF4Q92544 RALB-208ENST00000631312 311 ntTSL 5 BASIC21.78■■□□□ 1.08
TM9SF4Q92544 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
TM9SF4Q92544 AC010501.1-201ENST00000606270 1962 ntBASIC21.78■■□□□ 1.08
TM9SF4Q92544 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.77■■□□□ 1.08
TM9SF4Q92544 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF4Q92544 RPP21-222ENST00000433076 577 ntTSL 2 BASIC21.77■■□□□ 1.08
TM9SF4Q92544 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF4Q92544 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
TM9SF4Q92544 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF4Q92544 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF4Q92544 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
TM9SF4Q92544 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC21.76■■□□□ 1.07
TM9SF4Q92544 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.76■■□□□ 1.07
TM9SF4Q92544 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC21.76■■□□□ 1.07
TM9SF4Q92544 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
TM9SF4Q92544 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
TM9SF4Q92544 AC142381.3-201ENST00000568208 1670 ntBASIC21.75■■□□□ 1.07
TM9SF4Q92544 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF4Q92544 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF4Q92544 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF4Q92544 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF4Q92544 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF4Q92544 TRIR-202ENST00000588213 841 ntTSL 3 BASIC21.75■■□□□ 1.07
TM9SF4Q92544 MIR6724-1-201ENST00000616420 92 ntBASIC21.75■■□□□ 1.07
TM9SF4Q92544 MIR6724-2-201ENST00000616483 92 ntBASIC21.75■■□□□ 1.07
TM9SF4Q92544 MIR6724-4-201ENST00000617390 92 ntBASIC21.75■■□□□ 1.07
TM9SF4Q92544 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.75■■□□□ 1.07
TM9SF4Q92544 MIR6724-3-201ENST00000622482 92 ntBASIC21.75■■□□□ 1.07
TM9SF4Q92544 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF4Q92544 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF4Q92544 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC21.75■■□□□ 1.07
TM9SF4Q92544 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.75■■□□□ 1.07
TM9SF4Q92544 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF4Q92544 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF4Q92544 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
TM9SF4Q92544 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC21.74■■□□□ 1.07
TM9SF4Q92544 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC21.74■■□□□ 1.07
TM9SF4Q92544 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF4Q92544 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC21.74■■□□□ 1.07
TM9SF4Q92544 AL356740.2-201ENST00000601559 647 ntBASIC21.74■■□□□ 1.07
TM9SF4Q92544 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF4Q92544 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF4Q92544 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF4Q92544 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
TM9SF4Q92544 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.74■■□□□ 1.07
TM9SF4Q92544 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
TM9SF4Q92544 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.73■■□□□ 1.07
TM9SF4Q92544 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC21.73■■□□□ 1.07
TM9SF4Q92544 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC21.73■■□□□ 1.07
TM9SF4Q92544 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
TM9SF4Q92544 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
TM9SF4Q92544 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC21.73■■□□□ 1.07
TM9SF4Q92544 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.72■■□□□ 1.07
TM9SF4Q92544 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF4Q92544 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC21.72■■□□□ 1.07
TM9SF4Q92544 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.72■■□□□ 1.07
TM9SF4Q92544 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
TM9SF4Q92544 TK2-202ENST00000417693 1046 ntTSL 2 BASIC21.72■■□□□ 1.07
TM9SF4Q92544 AL139246.5-201ENST00000606645 996 ntBASIC21.72■■□□□ 1.07
TM9SF4Q92544 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
TM9SF4Q92544 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms