Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.38■■□□□ 1.49
RNF139Q8WU17 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC24.37■■□□□ 1.49
RNF139Q8WU17 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF139Q8WU17 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RNF139Q8WU17 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF139Q8WU17 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.37■■□□□ 1.49
RNF139Q8WU17 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC24.37■■□□□ 1.49
RNF139Q8WU17 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
RNF139Q8WU17 MIR6089-201ENST00000616698 64 ntBASIC24.37■■□□□ 1.49
RNF139Q8WU17 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
RNF139Q8WU17 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC24.37■■□□□ 1.49
RNF139Q8WU17 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC24.36■■□□□ 1.49
RNF139Q8WU17 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF139Q8WU17 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.36■■□□□ 1.49
RNF139Q8WU17 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC24.36■■□□□ 1.49
RNF139Q8WU17 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RNF139Q8WU17 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC24.36■■□□□ 1.49
RNF139Q8WU17 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
RNF139Q8WU17 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
RNF139Q8WU17 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF139Q8WU17 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC24.35■■□□□ 1.49
RNF139Q8WU17 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF139Q8WU17 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RNF139Q8WU17 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RNF139Q8WU17 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC24.34■■□□□ 1.49
RNF139Q8WU17 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC24.34■■□□□ 1.49
RNF139Q8WU17 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC24.34■■□□□ 1.49
RNF139Q8WU17 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.34■■□□□ 1.49
RNF139Q8WU17 MIR4787-201ENST00000607364 84 ntBASIC24.34■■□□□ 1.49
RNF139Q8WU17 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF139Q8WU17 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
RNF139Q8WU17 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF139Q8WU17 AC021242.3-201ENST00000607598 1377 ntBASIC24.33■■□□□ 1.49
RNF139Q8WU17 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
RNF139Q8WU17 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC24.33■■□□□ 1.49
RNF139Q8WU17 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
RNF139Q8WU17 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC24.33■■□□□ 1.48
RNF139Q8WU17 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
RNF139Q8WU17 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC24.32■■□□□ 1.48
RNF139Q8WU17 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC24.32■■□□□ 1.48
RNF139Q8WU17 LSR-205ENST00000427250 1606 ntTSL 2 BASIC24.32■■□□□ 1.48
RNF139Q8WU17 AP003733.4-201ENST00000623785 1697 ntBASIC24.31■■□□□ 1.48
RNF139Q8WU17 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF139Q8WU17 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
RNF139Q8WU17 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF139Q8WU17 GUSBP5-201ENST00000418136 578 ntBASIC24.31■■□□□ 1.48
RNF139Q8WU17 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
RNF139Q8WU17 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.31■■□□□ 1.48
RNF139Q8WU17 AF131216.4-201ENST00000638924 1588 ntBASIC24.31■■□□□ 1.48
RNF139Q8WU17 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF139Q8WU17 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC24.3■■□□□ 1.48
RNF139Q8WU17 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF139Q8WU17 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF139Q8WU17 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF139Q8WU17 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
RNF139Q8WU17 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
RNF139Q8WU17 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF139Q8WU17 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RNF139Q8WU17 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF139Q8WU17 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
RNF139Q8WU17 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
RNF139Q8WU17 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC24.29■■□□□ 1.48
RNF139Q8WU17 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF139Q8WU17 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
RNF139Q8WU17 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC24.28■■□□□ 1.48
RNF139Q8WU17 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
RNF139Q8WU17 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC24.28■■□□□ 1.48
RNF139Q8WU17 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
RNF139Q8WU17 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNF139Q8WU17 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC24.27■■□□□ 1.48
RNF139Q8WU17 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC24.27■■□□□ 1.48
RNF139Q8WU17 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNF139Q8WU17 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNF139Q8WU17 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
RNF139Q8WU17 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
RNF139Q8WU17 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
RNF139Q8WU17 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF139Q8WU17 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.26■■□□□ 1.47
RNF139Q8WU17 TK2-202ENST00000417693 1046 ntTSL 2 BASIC24.26■■□□□ 1.47
RNF139Q8WU17 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.26■■□□□ 1.47
RNF139Q8WU17 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF139Q8WU17 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC24.26■■□□□ 1.47
RNF139Q8WU17 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF139Q8WU17 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC24.26■■□□□ 1.47
RNF139Q8WU17 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
RNF139Q8WU17 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF139Q8WU17 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF139Q8WU17 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RNF139Q8WU17 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.25■■□□□ 1.47
RNF139Q8WU17 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.25■■□□□ 1.47
RNF139Q8WU17 CREM-229ENST00000474362 1030 ntTSL 2 BASIC24.25■■□□□ 1.47
RNF139Q8WU17 AC092028.1-203ENST00000608262 953 ntBASIC24.25■■□□□ 1.47
RNF139Q8WU17 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
RNF139Q8WU17 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC24.25■■□□□ 1.47
RNF139Q8WU17 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF139Q8WU17 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.24■■□□□ 1.47
RNF139Q8WU17 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF139Q8WU17 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF139Q8WU17 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
RNF139Q8WU17 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC24.24■■□□□ 1.47
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms