Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 AK1-201ENST00000223836 736 ntTSL 3 BASIC35.2■■■■□ 3.23
ARHGEF40Q8TER5 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC35.2■■■■□ 3.23
ARHGEF40Q8TER5 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC35.2■■■■□ 3.22
ARHGEF40Q8TER5 AC090877.2-201ENST00000558441 1738 ntBASIC35.19■■■■□ 3.22
ARHGEF40Q8TER5 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 DUX4L2-201ENST00000561772 1275 ntBASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 DUX4L6-201ENST00000626483 1275 ntBASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 DUX4L1-201ENST00000627662 1275 ntBASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 DUX4L8-201ENST00000629013 1275 ntBASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 DUX4L3-201ENST00000630187 1275 ntBASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 DUX4L7-201ENST00000630678 1275 ntBASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 DUX4L5-201ENST00000630834 1275 ntBASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC35.18■■■■□ 3.22
ARHGEF40Q8TER5 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
ARHGEF40Q8TER5 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
ARHGEF40Q8TER5 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC35.17■■■■□ 3.22
ARHGEF40Q8TER5 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC35.17■■■■□ 3.22
ARHGEF40Q8TER5 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC35.17■■■■□ 3.22
ARHGEF40Q8TER5 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC35.17■■■■□ 3.22
ARHGEF40Q8TER5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC35.16■■■■□ 3.22
ARHGEF40Q8TER5 YBX1P1-201ENST00000445822 960 ntBASIC35.16■■■■□ 3.22
ARHGEF40Q8TER5 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC35.16■■■■□ 3.22
ARHGEF40Q8TER5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC35.16■■■■□ 3.22
ARHGEF40Q8TER5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC35.16■■■■□ 3.22
ARHGEF40Q8TER5 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC35.16■■■■□ 3.22
ARHGEF40Q8TER5 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
ARHGEF40Q8TER5 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC35.16■■■■□ 3.22
ARHGEF40Q8TER5 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC35.16■■■■□ 3.22
ARHGEF40Q8TER5 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC35.16■■■■□ 3.22
ARHGEF40Q8TER5 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC35.15■■■■□ 3.22
ARHGEF40Q8TER5 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC35.15■■■■□ 3.22
ARHGEF40Q8TER5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC35.15■■■■□ 3.22
ARHGEF40Q8TER5 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC35.15■■■■□ 3.22
ARHGEF40Q8TER5 AC136469.2-201ENST00000623944 1028 ntBASIC35.15■■■■□ 3.22
ARHGEF40Q8TER5 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC35.15■■■■□ 3.22
ARHGEF40Q8TER5 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
ARHGEF40Q8TER5 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
ARHGEF40Q8TER5 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC35.14■■■■□ 3.22
ARHGEF40Q8TER5 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC35.13■■■■□ 3.21
ARHGEF40Q8TER5 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC35.13■■■■□ 3.21
ARHGEF40Q8TER5 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC35.13■■■■□ 3.21
ARHGEF40Q8TER5 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC35.13■■■■□ 3.21
ARHGEF40Q8TER5 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC35.13■■■■□ 3.21
ARHGEF40Q8TER5 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
ARHGEF40Q8TER5 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC35.13■■■■□ 3.21
ARHGEF40Q8TER5 AC005703.6-201ENST00000623265 1329 ntBASIC35.13■■■■□ 3.21
ARHGEF40Q8TER5 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC35.12■■■■□ 3.21
ARHGEF40Q8TER5 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC35.12■■■■□ 3.21
ARHGEF40Q8TER5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC35.12■■■■□ 3.21
ARHGEF40Q8TER5 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC35.12■■■■□ 3.21
ARHGEF40Q8TER5 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC35.12■■■■□ 3.21
ARHGEF40Q8TER5 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC35.12■■■■□ 3.21
ARHGEF40Q8TER5 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC35.12■■■■□ 3.21
ARHGEF40Q8TER5 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC35.11■■■■□ 3.21
ARHGEF40Q8TER5 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC35.11■■■■□ 3.21
ARHGEF40Q8TER5 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
ARHGEF40Q8TER5 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
ARHGEF40Q8TER5 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
ARHGEF40Q8TER5 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC35.11■■■■□ 3.21
ARHGEF40Q8TER5 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC35.1■■■■□ 3.21
ARHGEF40Q8TER5 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC35.1■■■■□ 3.21
ARHGEF40Q8TER5 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC35.1■■■■□ 3.21
ARHGEF40Q8TER5 DLX3-202ENST00000512495 834 ntTSL 2 BASIC35.1■■■■□ 3.21
ARHGEF40Q8TER5 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC35.09■■■■□ 3.21
ARHGEF40Q8TER5 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC35.09■■■■□ 3.21
ARHGEF40Q8TER5 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC35.09■■■■□ 3.21
ARHGEF40Q8TER5 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC35.08■■■■□ 3.21
ARHGEF40Q8TER5 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC35.08■■■■□ 3.21
ARHGEF40Q8TER5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC35.08■■■■□ 3.21
ARHGEF40Q8TER5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
ARHGEF40Q8TER5 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC35.07■■■■□ 3.21
ARHGEF40Q8TER5 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
ARHGEF40Q8TER5 AC099791.2-201ENST00000605725 427 ntBASIC35.07■■■■□ 3.21
ARHGEF40Q8TER5 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC35.07■■■■□ 3.21
ARHGEF40Q8TER5 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC35.07■■■■□ 3.2
ARHGEF40Q8TER5 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC35.07■■■■□ 3.2
ARHGEF40Q8TER5 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC35.06■■■■□ 3.2
ARHGEF40Q8TER5 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC35.06■■■■□ 3.2
ARHGEF40Q8TER5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC35.06■■■■□ 3.2
ARHGEF40Q8TER5 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC35.05■■■■□ 3.2
ARHGEF40Q8TER5 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC35.05■■■■□ 3.2
ARHGEF40Q8TER5 MPST-208ENST00000628507 698 ntTSL 5 BASIC35.05■■■■□ 3.2
ARHGEF40Q8TER5 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC35.04■■■■□ 3.2
ARHGEF40Q8TER5 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
ARHGEF40Q8TER5 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC35.04■■■■□ 3.2
ARHGEF40Q8TER5 AC027612.3-201ENST00000413684 1047 ntBASIC35.04■■■■□ 3.2
ARHGEF40Q8TER5 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC35.04■■■■□ 3.2
ARHGEF40Q8TER5 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC35.04■■■■□ 3.2
ARHGEF40Q8TER5 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC35.04■■■■□ 3.2
ARHGEF40Q8TER5 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC35.04■■■■□ 3.2
ARHGEF40Q8TER5 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
ARHGEF40Q8TER5 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC35.03■■■■□ 3.2
ARHGEF40Q8TER5 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC35.03■■■■□ 3.2
ARHGEF40Q8TER5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC35.03■■■■□ 3.2
ARHGEF40Q8TER5 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC35.03■■■■□ 3.2
ARHGEF40Q8TER5 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC35.03■■■■□ 3.2
ARHGEF40Q8TER5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC35.03■■■■□ 3.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms