Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC28.7■■■□□ 2.18
SNED1Q8TER0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC28.7■■■□□ 2.18
SNED1Q8TER0 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SNED1Q8TER0 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC28.69■■■□□ 2.18
SNED1Q8TER0 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
SNED1Q8TER0 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.69■■■□□ 2.18
SNED1Q8TER0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
SNED1Q8TER0 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SNED1Q8TER0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SNED1Q8TER0 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC28.68■■■□□ 2.18
SNED1Q8TER0 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC28.68■■■□□ 2.18
SNED1Q8TER0 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC28.68■■■□□ 2.18
SNED1Q8TER0 AC096887.2-201ENST00000623443 1957 ntBASIC28.67■■■□□ 2.18
SNED1Q8TER0 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.67■■■□□ 2.18
SNED1Q8TER0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC28.67■■■□□ 2.18
SNED1Q8TER0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC28.67■■■□□ 2.18
SNED1Q8TER0 AC097381.1-201ENST00000429019 1296 ntBASIC28.67■■■□□ 2.18
SNED1Q8TER0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC28.67■■■□□ 2.18
SNED1Q8TER0 AC004448.1-201ENST00000458332 883 ntBASIC28.67■■■□□ 2.18
SNED1Q8TER0 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNED1Q8TER0 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
SNED1Q8TER0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC28.66■■■□□ 2.18
SNED1Q8TER0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.66■■■□□ 2.18
SNED1Q8TER0 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC28.66■■■□□ 2.18
SNED1Q8TER0 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SNED1Q8TER0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC28.66■■■□□ 2.18
SNED1Q8TER0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC28.66■■■□□ 2.18
SNED1Q8TER0 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC28.66■■■□□ 2.18
SNED1Q8TER0 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC28.66■■■□□ 2.18
SNED1Q8TER0 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC28.65■■■□□ 2.18
SNED1Q8TER0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC28.65■■■□□ 2.18
SNED1Q8TER0 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SNED1Q8TER0 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC28.65■■■□□ 2.18
SNED1Q8TER0 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
SNED1Q8TER0 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC28.64■■■□□ 2.18
SNED1Q8TER0 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC28.64■■■□□ 2.18
SNED1Q8TER0 AC091305.1-201ENST00000479476 895 ntBASIC28.64■■■□□ 2.18
SNED1Q8TER0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC28.64■■■□□ 2.18
SNED1Q8TER0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC28.64■■■□□ 2.18
SNED1Q8TER0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC28.64■■■□□ 2.17
SNED1Q8TER0 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC28.63■■■□□ 2.17
SNED1Q8TER0 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC28.63■■■□□ 2.17
SNED1Q8TER0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC28.63■■■□□ 2.17
SNED1Q8TER0 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SNED1Q8TER0 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
SNED1Q8TER0 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
SNED1Q8TER0 RBM38-205ENST00000440234 686 ntTSL 2 BASIC28.61■■■□□ 2.17
SNED1Q8TER0 AC087623.3-201ENST00000607047 1098 ntBASIC28.61■■■□□ 2.17
SNED1Q8TER0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
SNED1Q8TER0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
SNED1Q8TER0 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC28.61■■■□□ 2.17
SNED1Q8TER0 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
SNED1Q8TER0 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SNED1Q8TER0 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC28.6■■■□□ 2.17
SNED1Q8TER0 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SNED1Q8TER0 STOX2-205ENST00000513034 807 ntTSL 3 BASIC28.6■■■□□ 2.17
SNED1Q8TER0 MIR4767-201ENST00000582827 78 ntBASIC28.6■■■□□ 2.17
SNED1Q8TER0 ZNF821-201ENST00000313565 1874 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
SNED1Q8TER0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
SNED1Q8TER0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.6■■■□□ 2.17
SNED1Q8TER0 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
SNED1Q8TER0 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC28.59■■■□□ 2.17
SNED1Q8TER0 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
SNED1Q8TER0 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.59■■■□□ 2.17
SNED1Q8TER0 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC28.59■■■□□ 2.17
SNED1Q8TER0 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC28.59■■■□□ 2.17
SNED1Q8TER0 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC28.58■■■□□ 2.17
SNED1Q8TER0 TWF2-201ENST00000305533 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
SNED1Q8TER0 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
SNED1Q8TER0 AL162430.1-201ENST00000480705 870 ntBASIC28.58■■■□□ 2.17
SNED1Q8TER0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC28.58■■■□□ 2.17
SNED1Q8TER0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC28.58■■■□□ 2.17
SNED1Q8TER0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC28.58■■■□□ 2.17
SNED1Q8TER0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC28.57■■■□□ 2.16
SNED1Q8TER0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNED1Q8TER0 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNED1Q8TER0 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNED1Q8TER0 DUX4L19-201ENST00000557448 1267 ntBASIC28.57■■■□□ 2.16
SNED1Q8TER0 MAG-206ENST00000597035 542 ntTSL 4 BASIC28.57■■■□□ 2.16
SNED1Q8TER0 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
SNED1Q8TER0 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SNED1Q8TER0 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
SNED1Q8TER0 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.56■■■□□ 2.16
SNED1Q8TER0 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.55■■■□□ 2.16
SNED1Q8TER0 PTMA-205ENST00000410064 814 ntTSL 2 BASIC28.55■■■□□ 2.16
SNED1Q8TER0 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNED1Q8TER0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
SNED1Q8TER0 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SNED1Q8TER0 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
SNED1Q8TER0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC28.54■■■□□ 2.16
SNED1Q8TER0 CA15P2-201ENST00000611168 834 ntBASIC28.54■■■□□ 2.16
SNED1Q8TER0 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC28.54■■■□□ 2.16
SNED1Q8TER0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
SNED1Q8TER0 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC28.53■■■□□ 2.16
SNED1Q8TER0 SERBP1P1-201ENST00000396021 1160 ntBASIC28.53■■■□□ 2.16
SNED1Q8TER0 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SNED1Q8TER0 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC28.53■■■□□ 2.16
SNED1Q8TER0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
SNED1Q8TER0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC28.53■■■□□ 2.16
SNED1Q8TER0 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 218.1 ms