Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
SNIP1Q8TAD8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC21.98■■□□□ 1.11
SNIP1Q8TAD8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNIP1Q8TAD8 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
SNIP1Q8TAD8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC21.98■■□□□ 1.11
SNIP1Q8TAD8 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.98■■□□□ 1.11
SNIP1Q8TAD8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC21.98■■□□□ 1.11
SNIP1Q8TAD8 MAG-206ENST00000597035 542 ntTSL 4 BASIC21.98■■□□□ 1.11
SNIP1Q8TAD8 RARRES2P11-201ENST00000635158 484 ntBASIC21.98■■□□□ 1.11
SNIP1Q8TAD8 AP004609.3-201ENST00000610705 1884 ntBASIC21.98■■□□□ 1.11
SNIP1Q8TAD8 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
SNIP1Q8TAD8 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNIP1Q8TAD8 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNIP1Q8TAD8 AC090877.2-201ENST00000558441 1738 ntBASIC21.97■■□□□ 1.11
SNIP1Q8TAD8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNIP1Q8TAD8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNIP1Q8TAD8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
SNIP1Q8TAD8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
SNIP1Q8TAD8 AC090192.1-201ENST00000517740 490 ntBASIC21.97■■□□□ 1.11
SNIP1Q8TAD8 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC21.96■■□□□ 1.11
SNIP1Q8TAD8 IRS3P-201ENST00000223076 1006 ntBASIC21.96■■□□□ 1.11
SNIP1Q8TAD8 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC21.96■■□□□ 1.11
SNIP1Q8TAD8 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNIP1Q8TAD8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNIP1Q8TAD8 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
SNIP1Q8TAD8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
SNIP1Q8TAD8 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNIP1Q8TAD8 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNIP1Q8TAD8 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SNIP1Q8TAD8 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC21.95■■□□□ 1.1
SNIP1Q8TAD8 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC21.95■■□□□ 1.1
SNIP1Q8TAD8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC21.95■■□□□ 1.1
SNIP1Q8TAD8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
SNIP1Q8TAD8 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC21.95■■□□□ 1.1
SNIP1Q8TAD8 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNIP1Q8TAD8 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC21.94■■□□□ 1.1
SNIP1Q8TAD8 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNIP1Q8TAD8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC21.94■■□□□ 1.1
SNIP1Q8TAD8 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
SNIP1Q8TAD8 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNIP1Q8TAD8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SNIP1Q8TAD8 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
SNIP1Q8TAD8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
SNIP1Q8TAD8 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.93■■□□□ 1.1
SNIP1Q8TAD8 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNIP1Q8TAD8 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNIP1Q8TAD8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
SNIP1Q8TAD8 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SNIP1Q8TAD8 SERBP1P1-201ENST00000396021 1160 ntBASIC21.91■■□□□ 1.1
SNIP1Q8TAD8 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.91■■□□□ 1.1
SNIP1Q8TAD8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
SNIP1Q8TAD8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 AC005703.6-201ENST00000623265 1329 ntBASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 JTB-203ENST00000368589 1216 ntTSL 2 BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 AL138724.1-201ENST00000606771 1088 ntBASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 AC011298.3-201ENST00000615796 283 ntBASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
SNIP1Q8TAD8 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC21.89■■□□□ 1.1
SNIP1Q8TAD8 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
SNIP1Q8TAD8 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNIP1Q8TAD8 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNIP1Q8TAD8 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
SNIP1Q8TAD8 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC21.89■■□□□ 1.09
SNIP1Q8TAD8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
SNIP1Q8TAD8 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
SNIP1Q8TAD8 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC21.88■■□□□ 1.09
SNIP1Q8TAD8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
SNIP1Q8TAD8 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.88■■□□□ 1.09
SNIP1Q8TAD8 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC21.88■■□□□ 1.09
SNIP1Q8TAD8 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC21.88■■□□□ 1.09
SNIP1Q8TAD8 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC21.88■■□□□ 1.09
SNIP1Q8TAD8 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.88■■□□□ 1.09
SNIP1Q8TAD8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
SNIP1Q8TAD8 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC21.87■■□□□ 1.09
SNIP1Q8TAD8 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC21.87■■□□□ 1.09
SNIP1Q8TAD8 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.87■■□□□ 1.09
SNIP1Q8TAD8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
SNIP1Q8TAD8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
SNIP1Q8TAD8 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
SNIP1Q8TAD8 PTCHD3P2-201ENST00000424937 1205 ntBASIC21.86■■□□□ 1.09
SNIP1Q8TAD8 AC008764.7-201ENST00000593779 1081 ntBASIC21.86■■□□□ 1.09
SNIP1Q8TAD8 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC21.86■■□□□ 1.09
SNIP1Q8TAD8 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC21.86■■□□□ 1.09
SNIP1Q8TAD8 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.86■■□□□ 1.09
SNIP1Q8TAD8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC21.86■■□□□ 1.09
SNIP1Q8TAD8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC21.86■■□□□ 1.09
SNIP1Q8TAD8 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC21.86■■□□□ 1.09
SNIP1Q8TAD8 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.7 ms