Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
COL22A1Q8NFW1 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
COL22A1Q8NFW1 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC31.72■■■□□ 2.67
COL22A1Q8NFW1 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC31.72■■■□□ 2.67
COL22A1Q8NFW1 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC31.72■■■□□ 2.67
COL22A1Q8NFW1 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC31.72■■■□□ 2.67
COL22A1Q8NFW1 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC31.71■■■□□ 2.67
COL22A1Q8NFW1 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.71■■■□□ 2.67
COL22A1Q8NFW1 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.71■■■□□ 2.67
COL22A1Q8NFW1 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC31.71■■■□□ 2.67
COL22A1Q8NFW1 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
COL22A1Q8NFW1 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
COL22A1Q8NFW1 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.67
COL22A1Q8NFW1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
COL22A1Q8NFW1 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
COL22A1Q8NFW1 AC008764.7-201ENST00000593779 1081 ntBASIC31.7■■■□□ 2.66
COL22A1Q8NFW1 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC31.7■■■□□ 2.66
COL22A1Q8NFW1 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC31.7■■■□□ 2.66
COL22A1Q8NFW1 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL22A1Q8NFW1 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL22A1Q8NFW1 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC31.69■■■□□ 2.66
COL22A1Q8NFW1 AK1-201ENST00000223836 736 ntTSL 3 BASIC31.69■■■□□ 2.66
COL22A1Q8NFW1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL22A1Q8NFW1 SLC47A1P1-202ENST00000449666 945 ntBASIC31.69■■■□□ 2.66
COL22A1Q8NFW1 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC31.69■■■□□ 2.66
COL22A1Q8NFW1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
COL22A1Q8NFW1 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
COL22A1Q8NFW1 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
COL22A1Q8NFW1 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
COL22A1Q8NFW1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC31.68■■■□□ 2.66
COL22A1Q8NFW1 AP004609.3-201ENST00000610705 1884 ntBASIC31.68■■■□□ 2.66
COL22A1Q8NFW1 AC005703.6-201ENST00000623265 1329 ntBASIC31.67■■■□□ 2.66
COL22A1Q8NFW1 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
COL22A1Q8NFW1 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC31.67■■■□□ 2.66
COL22A1Q8NFW1 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC31.67■■■□□ 2.66
COL22A1Q8NFW1 ID1-201ENST00000376105 1233 ntBASIC31.67■■■□□ 2.66
COL22A1Q8NFW1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC31.67■■■□□ 2.66
COL22A1Q8NFW1 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.66■■■□□ 2.66
COL22A1Q8NFW1 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC31.66■■■□□ 2.66
COL22A1Q8NFW1 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC31.66■■■□□ 2.66
COL22A1Q8NFW1 AC136469.2-201ENST00000623944 1028 ntBASIC31.66■■■□□ 2.66
COL22A1Q8NFW1 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC31.66■■■□□ 2.66
COL22A1Q8NFW1 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
COL22A1Q8NFW1 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC31.65■■■□□ 2.66
COL22A1Q8NFW1 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC31.65■■■□□ 2.66
COL22A1Q8NFW1 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
COL22A1Q8NFW1 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 DUX4L2-201ENST00000561772 1275 ntBASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 DUX4L6-201ENST00000626483 1275 ntBASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 DUX4L1-201ENST00000627662 1275 ntBASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 DUX4L8-201ENST00000629013 1275 ntBASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 DUX4L3-201ENST00000630187 1275 ntBASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 DUX4L7-201ENST00000630678 1275 ntBASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 DUX4L5-201ENST00000630834 1275 ntBASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
COL22A1Q8NFW1 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.64■■■□□ 2.65
COL22A1Q8NFW1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL22A1Q8NFW1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL22A1Q8NFW1 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL22A1Q8NFW1 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL22A1Q8NFW1 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC31.63■■■□□ 2.65
COL22A1Q8NFW1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
COL22A1Q8NFW1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC31.62■■■□□ 2.65
COL22A1Q8NFW1 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC31.62■■■□□ 2.65
COL22A1Q8NFW1 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC31.62■■■□□ 2.65
COL22A1Q8NFW1 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
COL22A1Q8NFW1 YBX1P1-201ENST00000445822 960 ntBASIC31.61■■■□□ 2.65
COL22A1Q8NFW1 AC099791.2-201ENST00000605725 427 ntBASIC31.61■■■□□ 2.65
COL22A1Q8NFW1 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC31.61■■■□□ 2.65
COL22A1Q8NFW1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
COL22A1Q8NFW1 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
COL22A1Q8NFW1 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC31.61■■■□□ 2.65
COL22A1Q8NFW1 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
COL22A1Q8NFW1 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC31.6■■■□□ 2.65
COL22A1Q8NFW1 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC31.6■■■□□ 2.65
COL22A1Q8NFW1 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL22A1Q8NFW1 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL22A1Q8NFW1 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
COL22A1Q8NFW1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
COL22A1Q8NFW1 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
COL22A1Q8NFW1 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC31.59■■■□□ 2.65
COL22A1Q8NFW1 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC31.59■■■□□ 2.65
COL22A1Q8NFW1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
COL22A1Q8NFW1 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
COL22A1Q8NFW1 AC027612.3-201ENST00000413684 1047 ntBASIC31.58■■■□□ 2.65
COL22A1Q8NFW1 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC31.58■■■□□ 2.65
COL22A1Q8NFW1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC31.58■■■□□ 2.65
COL22A1Q8NFW1 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
COL22A1Q8NFW1 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
COL22A1Q8NFW1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC31.57■■■□□ 2.64
COL22A1Q8NFW1 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC31.57■■■□□ 2.64
COL22A1Q8NFW1 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC31.57■■■□□ 2.64
COL22A1Q8NFW1 MPST-208ENST00000628507 698 ntTSL 5 BASIC31.57■■■□□ 2.64
COL22A1Q8NFW1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
COL22A1Q8NFW1 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.57■■■□□ 2.64
COL22A1Q8NFW1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms