Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 AL391422.3-201ENST00000603791 2761 ntBASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
SPTSSBQ8NFR3 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPTSSBQ8NFR3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC12.84□□□□□ -0.35
SPTSSBQ8NFR3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPTSSBQ8NFR3 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC12.84□□□□□ -0.35
SPTSSBQ8NFR3 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SPTSSBQ8NFR3 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPTSSBQ8NFR3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SPTSSBQ8NFR3 LINC01003-201ENST00000564834 1764 ntBASIC12.84□□□□□ -0.35
SPTSSBQ8NFR3 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC12.84□□□□□ -0.35
SPTSSBQ8NFR3 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SPTSSBQ8NFR3 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SPTSSBQ8NFR3 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
SPTSSBQ8NFR3 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPTSSBQ8NFR3 MYB-221ENST00000527615 2381 ntTSL 5 BASIC12.83□□□□□ -0.36
SPTSSBQ8NFR3 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SPTSSBQ8NFR3 AC015813.7-201ENST00000623294 581 ntBASIC12.83□□□□□ -0.36
SPTSSBQ8NFR3 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPTSSBQ8NFR3 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPTSSBQ8NFR3 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SPTSSBQ8NFR3 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC12.83□□□□□ -0.36
SPTSSBQ8NFR3 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SPTSSBQ8NFR3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPTSSBQ8NFR3 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPTSSBQ8NFR3 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPTSSBQ8NFR3 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPTSSBQ8NFR3 PKD1P1-201ENST00000458669 6805 ntBASIC12.82□□□□□ -0.36
SPTSSBQ8NFR3 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
SPTSSBQ8NFR3 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPTSSBQ8NFR3 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC12.82□□□□□ -0.36
SPTSSBQ8NFR3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
SPTSSBQ8NFR3 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SPTSSBQ8NFR3 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC12.8□□□□□ -0.36
SPTSSBQ8NFR3 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 AP004833.2-201ENST00000532228 1454 ntBASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SPTSSBQ8NFR3 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPTSSBQ8NFR3 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPTSSBQ8NFR3 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
SPTSSBQ8NFR3 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC12.78□□□□□ -0.36
SPTSSBQ8NFR3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPTSSBQ8NFR3 LRRC73-201ENST00000372441 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SPTSSBQ8NFR3 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
SPTSSBQ8NFR3 AF106564.1-201ENST00000607058 2553 ntBASIC12.78□□□□□ -0.36
SPTSSBQ8NFR3 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 14.8 ms