Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 AL031432.3-201ENST00000607698 485 ntBASIC23.74■■□□□ 1.39
SYNPOQ8N3V7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SYNPOQ8N3V7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.73■■□□□ 1.39
SYNPOQ8N3V7 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC23.73■■□□□ 1.39
SYNPOQ8N3V7 AL355001.2-201ENST00000620617 1191 ntBASIC23.73■■□□□ 1.39
SYNPOQ8N3V7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
SYNPOQ8N3V7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC23.73■■□□□ 1.39
SYNPOQ8N3V7 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
SYNPOQ8N3V7 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
SYNPOQ8N3V7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SYNPOQ8N3V7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
SYNPOQ8N3V7 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC23.72■■□□□ 1.39
SYNPOQ8N3V7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC23.72■■□□□ 1.39
SYNPOQ8N3V7 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SYNPOQ8N3V7 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SYNPOQ8N3V7 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SYNPOQ8N3V7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.72■■□□□ 1.39
SYNPOQ8N3V7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
SYNPOQ8N3V7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.71■■□□□ 1.39
SYNPOQ8N3V7 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
SYNPOQ8N3V7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC23.71■■□□□ 1.39
SYNPOQ8N3V7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC23.71■■□□□ 1.39
SYNPOQ8N3V7 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
SYNPOQ8N3V7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
SYNPOQ8N3V7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC23.7■■□□□ 1.38
SYNPOQ8N3V7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC23.7■■□□□ 1.38
SYNPOQ8N3V7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
SYNPOQ8N3V7 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC23.69■■□□□ 1.38
SYNPOQ8N3V7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.69■■□□□ 1.38
SYNPOQ8N3V7 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
SYNPOQ8N3V7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
SYNPOQ8N3V7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SYNPOQ8N3V7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC23.69■■□□□ 1.38
SYNPOQ8N3V7 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SYNPOQ8N3V7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
SYNPOQ8N3V7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
SYNPOQ8N3V7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
SYNPOQ8N3V7 DUX4L19-201ENST00000557448 1267 ntBASIC23.68■■□□□ 1.38
SYNPOQ8N3V7 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC23.68■■□□□ 1.38
SYNPOQ8N3V7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC23.68■■□□□ 1.38
SYNPOQ8N3V7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC23.68■■□□□ 1.38
SYNPOQ8N3V7 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
SYNPOQ8N3V7 AC026271.2-201ENST00000428091 497 ntBASIC23.67■■□□□ 1.38
SYNPOQ8N3V7 AC024257.2-201ENST00000549699 147 ntBASIC23.67■■□□□ 1.38
SYNPOQ8N3V7 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
SYNPOQ8N3V7 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC23.66■■□□□ 1.38
SYNPOQ8N3V7 LGR4-203ENST00000480977 492 ntTSL 2 BASIC23.66■■□□□ 1.38
SYNPOQ8N3V7 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
SYNPOQ8N3V7 AC092666.2-201ENST00000613287 246 ntBASIC23.66■■□□□ 1.38
SYNPOQ8N3V7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC23.66■■□□□ 1.38
SYNPOQ8N3V7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC23.66■■□□□ 1.38
SYNPOQ8N3V7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.66■■□□□ 1.38
SYNPOQ8N3V7 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
SYNPOQ8N3V7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.65■■□□□ 1.38
SYNPOQ8N3V7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYNPOQ8N3V7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYNPOQ8N3V7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
SYNPOQ8N3V7 AC004448.1-201ENST00000458332 883 ntBASIC23.65■■□□□ 1.38
SYNPOQ8N3V7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC23.65■■□□□ 1.38
SYNPOQ8N3V7 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYNPOQ8N3V7 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYNPOQ8N3V7 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
SYNPOQ8N3V7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
SYNPOQ8N3V7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC23.64■■□□□ 1.37
SYNPOQ8N3V7 MIR5787-201ENST00000611784 55 ntBASIC23.64■■□□□ 1.37
SYNPOQ8N3V7 SF1-220ENST00000626028 704 ntTSL 2 BASIC23.64■■□□□ 1.37
SYNPOQ8N3V7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SYNPOQ8N3V7 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC23.64■■□□□ 1.37
SYNPOQ8N3V7 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.37
SYNPOQ8N3V7 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.64■■□□□ 1.37
SYNPOQ8N3V7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 HYI-206ENST00000372434 1025 ntTSL 5 BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 AC097639.1-201ENST00000565519 1891 ntBASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
SYNPOQ8N3V7 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 AC092171.4-201ENST00000609130 632 ntBASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC23.62■■□□□ 1.37
SYNPOQ8N3V7 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms