Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 AC135279.3-201ENST00000610945 1311 ntBASIC25.17■■□□□ 1.62
NPAS4Q8IUM7 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NPAS4Q8IUM7 ZNRF2P3-201ENST00000424200 374 ntBASIC25.17■■□□□ 1.62
NPAS4Q8IUM7 AL031432.3-201ENST00000607698 485 ntBASIC25.17■■□□□ 1.62
NPAS4Q8IUM7 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC25.17■■□□□ 1.62
NPAS4Q8IUM7 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NPAS4Q8IUM7 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
NPAS4Q8IUM7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
NPAS4Q8IUM7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC25.17■■□□□ 1.62
NPAS4Q8IUM7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.16■■□□□ 1.62
NPAS4Q8IUM7 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
NPAS4Q8IUM7 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
NPAS4Q8IUM7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
NPAS4Q8IUM7 GATM-206ENST00000558336 1522 ntTSL 2 BASIC25.16■■□□□ 1.62
NPAS4Q8IUM7 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC25.16■■□□□ 1.62
NPAS4Q8IUM7 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
NPAS4Q8IUM7 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC25.15■■□□□ 1.62
NPAS4Q8IUM7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NPAS4Q8IUM7 SUDS3P1-201ENST00000505831 966 ntBASIC25.15■■□□□ 1.62
NPAS4Q8IUM7 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC25.15■■□□□ 1.62
NPAS4Q8IUM7 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
NPAS4Q8IUM7 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
NPAS4Q8IUM7 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
NPAS4Q8IUM7 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
NPAS4Q8IUM7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC25.14■■□□□ 1.62
NPAS4Q8IUM7 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
NPAS4Q8IUM7 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC25.14■■□□□ 1.61
NPAS4Q8IUM7 AC005703.6-201ENST00000623265 1329 ntBASIC25.13■■□□□ 1.61
NPAS4Q8IUM7 EDA-201ENST00000338901 1233 ntBASIC25.13■■□□□ 1.61
NPAS4Q8IUM7 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC25.13■■□□□ 1.61
NPAS4Q8IUM7 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC25.13■■□□□ 1.61
NPAS4Q8IUM7 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC25.13■■□□□ 1.61
NPAS4Q8IUM7 AC024257.2-201ENST00000549699 147 ntBASIC25.13■■□□□ 1.61
NPAS4Q8IUM7 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC25.13■■□□□ 1.61
NPAS4Q8IUM7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.13■■□□□ 1.61
NPAS4Q8IUM7 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
NPAS4Q8IUM7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
NPAS4Q8IUM7 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NPAS4Q8IUM7 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
NPAS4Q8IUM7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NPAS4Q8IUM7 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
NPAS4Q8IUM7 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC25.12■■□□□ 1.61
NPAS4Q8IUM7 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NPAS4Q8IUM7 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC25.12■■□□□ 1.61
NPAS4Q8IUM7 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NPAS4Q8IUM7 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
NPAS4Q8IUM7 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.11■■□□□ 1.61
NPAS4Q8IUM7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC25.11■■□□□ 1.61
NPAS4Q8IUM7 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
NPAS4Q8IUM7 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC25.11■■□□□ 1.61
NPAS4Q8IUM7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
NPAS4Q8IUM7 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.11■■□□□ 1.61
NPAS4Q8IUM7 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
NPAS4Q8IUM7 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
NPAS4Q8IUM7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC25.1■■□□□ 1.61
NPAS4Q8IUM7 AL355001.2-201ENST00000620617 1191 ntBASIC25.1■■□□□ 1.61
NPAS4Q8IUM7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
NPAS4Q8IUM7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
NPAS4Q8IUM7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
NPAS4Q8IUM7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NPAS4Q8IUM7 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NPAS4Q8IUM7 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
NPAS4Q8IUM7 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
NPAS4Q8IUM7 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC25.09■■□□□ 1.61
NPAS4Q8IUM7 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC25.09■■□□□ 1.61
NPAS4Q8IUM7 RARRES2P6-201ENST00000567333 442 ntBASIC25.09■■□□□ 1.61
NPAS4Q8IUM7 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC25.09■■□□□ 1.61
NPAS4Q8IUM7 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
NPAS4Q8IUM7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC25.08■■□□□ 1.61
NPAS4Q8IUM7 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC25.08■■□□□ 1.61
NPAS4Q8IUM7 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
NPAS4Q8IUM7 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
NPAS4Q8IUM7 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
NPAS4Q8IUM7 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC25.08■■□□□ 1.6
NPAS4Q8IUM7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 AC092803.2-201ENST00000564287 1899 ntBASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 DUX4L19-201ENST00000557448 1267 ntBASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
NPAS4Q8IUM7 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
NPAS4Q8IUM7 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NPAS4Q8IUM7 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC25.06■■□□□ 1.6
NPAS4Q8IUM7 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NPAS4Q8IUM7 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NPAS4Q8IUM7 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NPAS4Q8IUM7 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NPAS4Q8IUM7 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC25.06■■□□□ 1.6
NPAS4Q8IUM7 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
NPAS4Q8IUM7 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC25.06■■□□□ 1.6
NPAS4Q8IUM7 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
NPAS4Q8IUM7 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.05■■□□□ 1.6
NPAS4Q8IUM7 ZKSCAN7-206ENST00000431636 1692 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms