Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 AC139795.1-202ENST00000500444 432 ntBASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HIST2H3AQ71DI3 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H3AQ71DI3 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H3AQ71DI3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H3AQ71DI3 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H3AQ71DI3 AC022616.5-201ENST00000518796 181 ntBASIC20.35■□□□□ 0.85
HIST2H3AQ71DI3 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
HIST2H3AQ71DI3 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.35■□□□□ 0.85
HIST2H3AQ71DI3 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 TSPY13P-201ENST00000338964 914 ntBASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 AC074183.2-201ENST00000623112 922 ntBASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
HIST2H3AQ71DI3 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H3AQ71DI3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.33■□□□□ 0.85
HIST2H3AQ71DI3 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H3AQ71DI3 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H3AQ71DI3 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H3AQ71DI3 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
HIST2H3AQ71DI3 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.33■□□□□ 0.84
HIST2H3AQ71DI3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HIST2H3AQ71DI3 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
HIST2H3AQ71DI3 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.33■□□□□ 0.84
HIST2H3AQ71DI3 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.33■□□□□ 0.84
HIST2H3AQ71DI3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 AC011551.1-201ENST00000614101 683 ntBASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.32■□□□□ 0.84
HIST2H3AQ71DI3 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST2H3AQ71DI3 AC012354.3-201ENST00000623734 483 ntBASIC20.31■□□□□ 0.84
HIST2H3AQ71DI3 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.3■□□□□ 0.84
HIST2H3AQ71DI3 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIST2H3AQ71DI3 PVT1_1.1-201ENST00000615125 194 ntBASIC20.3■□□□□ 0.84
HIST2H3AQ71DI3 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.3■□□□□ 0.84
HIST2H3AQ71DI3 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HIST2H3AQ71DI3 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST2H3AQ71DI3 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HIST2H3AQ71DI3 AC004812.2-201ENST00000611079 2094 ntBASIC20.29■□□□□ 0.84
HIST2H3AQ71DI3 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST2H3AQ71DI3 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST2H3AQ71DI3 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST2H3AQ71DI3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.28■□□□□ 0.84
HIST2H3AQ71DI3 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.28■□□□□ 0.84
HIST2H3AQ71DI3 BHLHE23-202ENST00000612929 1109 ntBASIC20.28■□□□□ 0.84
HIST2H3AQ71DI3 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST2H3AQ71DI3 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST2H3AQ71DI3 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST2H3AQ71DI3 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.28■□□□□ 0.84
HIST2H3AQ71DI3 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
HIST2H3AQ71DI3 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.27■□□□□ 0.84
HIST2H3AQ71DI3 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
HIST2H3AQ71DI3 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIST2H3AQ71DI3 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIST2H3AQ71DI3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIST2H3AQ71DI3 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.27■□□□□ 0.84
HIST2H3AQ71DI3 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIST2H3AQ71DI3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.27■□□□□ 0.84
HIST2H3AQ71DI3 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HIST2H3AQ71DI3 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIST2H3AQ71DI3 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIST2H3AQ71DI3 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST2H3AQ71DI3 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HIST2H3AQ71DI3 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.26■□□□□ 0.83
HIST2H3AQ71DI3 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST2H3AQ71DI3 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST2H3AQ71DI3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HIST2H3AQ71DI3 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
HIST2H3AQ71DI3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HIST2H3AQ71DI3 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms