Protein–RNA interactions for Protein: Q5Y7H0

HLA-DQA1, HLA class II histocompatibility antigen, DQ alpha 1 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1Q5Y7H0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DQA1Q5Y7H0 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
HLA-DQA1Q5Y7H0 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC21.61■■□□□ 1.05
HLA-DQA1Q5Y7H0 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.61■■□□□ 1.05
HLA-DQA1Q5Y7H0 AL451085.2-201ENST00000605085 799 ntBASIC21.6■■□□□ 1.05
HLA-DQA1Q5Y7H0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQA1Q5Y7H0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
HLA-DQA1Q5Y7H0 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC21.6■■□□□ 1.05
HLA-DQA1Q5Y7H0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQA1Q5Y7H0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC21.59■■□□□ 1.05
HLA-DQA1Q5Y7H0 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQA1Q5Y7H0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQA1Q5Y7H0 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.59■■□□□ 1.05
HLA-DQA1Q5Y7H0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQA1Q5Y7H0 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQA1Q5Y7H0 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.59■■□□□ 1.05
HLA-DQA1Q5Y7H0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQA1Q5Y7H0 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
HLA-DQA1Q5Y7H0 AC138932.3-201ENST00000567634 1902 ntBASIC21.59■■□□□ 1.05
HLA-DQA1Q5Y7H0 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DQA1Q5Y7H0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DQA1Q5Y7H0 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DQA1Q5Y7H0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DQA1Q5Y7H0 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.05
HLA-DQA1Q5Y7H0 BX664725.1-201ENST00000438252 379 ntBASIC21.58■■□□□ 1.05
HLA-DQA1Q5Y7H0 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.58■■□□□ 1.05
HLA-DQA1Q5Y7H0 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
HLA-DQA1Q5Y7H0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.58■■□□□ 1.04
HLA-DQA1Q5Y7H0 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQA1Q5Y7H0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC21.57■■□□□ 1.04
HLA-DQA1Q5Y7H0 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.57■■□□□ 1.04
HLA-DQA1Q5Y7H0 AC009299.2-201ENST00000482477 511 ntBASIC21.57■■□□□ 1.04
HLA-DQA1Q5Y7H0 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
HLA-DQA1Q5Y7H0 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
HLA-DQA1Q5Y7H0 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQA1Q5Y7H0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
HLA-DQA1Q5Y7H0 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
HLA-DQA1Q5Y7H0 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DQA1Q5Y7H0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
HLA-DQA1Q5Y7H0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
HLA-DQA1Q5Y7H0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.55■■□□□ 1.04
HLA-DQA1Q5Y7H0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DQA1Q5Y7H0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DQA1Q5Y7H0 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DQA1Q5Y7H0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DQA1Q5Y7H0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DQA1Q5Y7H0 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
HLA-DQA1Q5Y7H0 KRT125P-201ENST00000546827 989 ntBASIC21.54■■□□□ 1.04
HLA-DQA1Q5Y7H0 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.54■■□□□ 1.04
HLA-DQA1Q5Y7H0 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
HLA-DQA1Q5Y7H0 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DQA1Q5Y7H0 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DQA1Q5Y7H0 AC137630.3-201ENST00000607245 391 ntBASIC21.53■■□□□ 1.04
HLA-DQA1Q5Y7H0 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC21.53■■□□□ 1.04
HLA-DQA1Q5Y7H0 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DQA1Q5Y7H0 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DQA1Q5Y7H0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
HLA-DQA1Q5Y7H0 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DQA1Q5Y7H0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DQA1Q5Y7H0 AL035685.1-201ENST00000636663 812 ntBASIC21.52■■□□□ 1.04
HLA-DQA1Q5Y7H0 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DQA1Q5Y7H0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
HLA-DQA1Q5Y7H0 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC21.52■■□□□ 1.03
HLA-DQA1Q5Y7H0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DQA1Q5Y7H0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.51■■□□□ 1.03
HLA-DQA1Q5Y7H0 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.51■■□□□ 1.03
HLA-DQA1Q5Y7H0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.51■■□□□ 1.03
HLA-DQA1Q5Y7H0 Z92544.1-202ENST00000571933 1220 ntBASIC21.51■■□□□ 1.03
HLA-DQA1Q5Y7H0 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
HLA-DQA1Q5Y7H0 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
HLA-DQA1Q5Y7H0 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC21.51■■□□□ 1.03
HLA-DQA1Q5Y7H0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DQA1Q5Y7H0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DQA1Q5Y7H0 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DQA1Q5Y7H0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC21.5■■□□□ 1.03
HLA-DQA1Q5Y7H0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DQA1Q5Y7H0 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC21.5■■□□□ 1.03
HLA-DQA1Q5Y7H0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
HLA-DQA1Q5Y7H0 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC21.5■■□□□ 1.03
HLA-DQA1Q5Y7H0 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC21.5■■□□□ 1.03
HLA-DQA1Q5Y7H0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC21.5■■□□□ 1.03
HLA-DQA1Q5Y7H0 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DQA1Q5Y7H0 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.49■■□□□ 1.03
HLA-DQA1Q5Y7H0 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DQA1Q5Y7H0 AC239859.2-201ENST00000444165 318 ntBASIC21.49■■□□□ 1.03
HLA-DQA1Q5Y7H0 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC21.49■■□□□ 1.03
HLA-DQA1Q5Y7H0 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
HLA-DQA1Q5Y7H0 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC21.49■■□□□ 1.03
HLA-DQA1Q5Y7H0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.49■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms