Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.33■□□□□ 0.84
HIST1H3AP68431 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H3AP68431 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H3AP68431 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H3AP68431 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.32■□□□□ 0.84
HIST1H3AP68431 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H3AP68431 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H3AP68431 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.32■□□□□ 0.84
HIST1H3AP68431 AC011551.1-201ENST00000614101 683 ntBASIC20.32■□□□□ 0.84
HIST1H3AP68431 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.32■□□□□ 0.84
HIST1H3AP68431 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.32■□□□□ 0.84
HIST1H3AP68431 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H3AP68431 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
HIST1H3AP68431 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H3AP68431 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
HIST1H3AP68431 AC012354.3-201ENST00000623734 483 ntBASIC20.31■□□□□ 0.84
HIST1H3AP68431 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.3■□□□□ 0.84
HIST1H3AP68431 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
HIST1H3AP68431 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
HIST1H3AP68431 PVT1_1.1-201ENST00000615125 194 ntBASIC20.3■□□□□ 0.84
HIST1H3AP68431 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
HIST1H3AP68431 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
HIST1H3AP68431 AC004812.2-201ENST00000611079 2094 ntBASIC20.29■□□□□ 0.84
HIST1H3AP68431 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST1H3AP68431 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
HIST1H3AP68431 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H3AP68431 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.28■□□□□ 0.84
HIST1H3AP68431 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.28■□□□□ 0.84
HIST1H3AP68431 BHLHE23-202ENST00000612929 1109 ntBASIC20.28■□□□□ 0.84
HIST1H3AP68431 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H3AP68431 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H3AP68431 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
HIST1H3AP68431 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.28■□□□□ 0.84
HIST1H3AP68431 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.28■□□□□ 0.84
HIST1H3AP68431 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.27■□□□□ 0.84
HIST1H3AP68431 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
HIST1H3AP68431 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H3AP68431 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H3AP68431 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H3AP68431 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.27■□□□□ 0.84
HIST1H3AP68431 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
HIST1H3AP68431 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.27■□□□□ 0.84
HIST1H3AP68431 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
HIST1H3AP68431 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIST1H3AP68431 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
HIST1H3AP68431 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H3AP68431 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
HIST1H3AP68431 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
HIST1H3AP68431 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.26■□□□□ 0.83
HIST1H3AP68431 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H3AP68431 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H3AP68431 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
HIST1H3AP68431 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
HIST1H3AP68431 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC20.26■□□□□ 0.83
HIST1H3AP68431 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
HIST1H3AP68431 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.26■□□□□ 0.83
HIST1H3AP68431 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
HIST1H3AP68431 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H3AP68431 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
HIST1H3AP68431 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.25■□□□□ 0.83
HIST1H3AP68431 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.25■□□□□ 0.83
HIST1H3AP68431 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.25■□□□□ 0.83
HIST1H3AP68431 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC20.25■□□□□ 0.83
HIST1H3AP68431 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.25■□□□□ 0.83
HIST1H3AP68431 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.25■□□□□ 0.83
HIST1H3AP68431 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H3AP68431 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
HIST1H3AP68431 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
HIST1H3AP68431 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.24■□□□□ 0.83
HIST1H3AP68431 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H3AP68431 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.24■□□□□ 0.83
HIST1H3AP68431 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H3AP68431 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST1H3AP68431 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC20.24■□□□□ 0.83
HIST1H3AP68431 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H3AP68431 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
HIST1H3AP68431 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H3AP68431 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H3AP68431 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H3AP68431 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
HIST1H3AP68431 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H3AP68431 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H3AP68431 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H3AP68431 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.23■□□□□ 0.83
HIST1H3AP68431 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H3AP68431 AL033527.3-201ENST00000566366 1196 ntBASIC20.23■□□□□ 0.83
HIST1H3AP68431 AC010980.1-201ENST00000587192 1142 ntBASIC20.23■□□□□ 0.83
HIST1H3AP68431 AL161729.1-201ENST00000604104 1402 ntBASIC20.23■□□□□ 0.83
HIST1H3AP68431 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H3AP68431 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
HIST1H3AP68431 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.23■□□□□ 0.83
HIST1H3AP68431 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
HIST1H3AP68431 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HIST1H3AP68431 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC20.23■□□□□ 0.83
HIST1H3AP68431 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H3AP68431 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H3AP68431 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
HIST1H3AP68431 KRT18P24-201ENST00000344739 1156 ntBASIC20.22■□□□□ 0.83
HIST1H3AP68431 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HIST1H3AP68431 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms