Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.4■□□□□ 0.86
LSM6P62312 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LSM6P62312 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LSM6P62312 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LSM6P62312 AC012354.3-201ENST00000623734 483 ntBASIC20.4■□□□□ 0.86
LSM6P62312 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LSM6P62312 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
LSM6P62312 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LSM6P62312 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.39■□□□□ 0.85
LSM6P62312 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.39■□□□□ 0.85
LSM6P62312 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
LSM6P62312 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.39■□□□□ 0.85
LSM6P62312 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
LSM6P62312 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM6P62312 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM6P62312 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LSM6P62312 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.38■□□□□ 0.85
LSM6P62312 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.38■□□□□ 0.85
LSM6P62312 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.38■□□□□ 0.85
LSM6P62312 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.38■□□□□ 0.85
LSM6P62312 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM6P62312 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.37■□□□□ 0.85
LSM6P62312 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM6P62312 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSM6P62312 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM6P62312 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM6P62312 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LSM6P62312 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LSM6P62312 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
LSM6P62312 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM6P62312 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LSM6P62312 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.36■□□□□ 0.85
LSM6P62312 AC004812.2-201ENST00000611079 2094 ntBASIC20.36■□□□□ 0.85
LSM6P62312 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LSM6P62312 SHD-204ENST00000599689 1729 ntTSL 5 BASIC20.36■□□□□ 0.85
LSM6P62312 AL161729.1-201ENST00000604104 1402 ntBASIC20.36■□□□□ 0.85
LSM6P62312 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC20.35■□□□□ 0.85
LSM6P62312 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.35■□□□□ 0.85
LSM6P62312 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM6P62312 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.35■□□□□ 0.85
LSM6P62312 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LSM6P62312 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC20.35■□□□□ 0.85
LSM6P62312 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.35■□□□□ 0.85
LSM6P62312 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.35■□□□□ 0.85
LSM6P62312 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
LSM6P62312 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
LSM6P62312 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LSM6P62312 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LSM6P62312 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LSM6P62312 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM6P62312 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM6P62312 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC20.34■□□□□ 0.85
LSM6P62312 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
LSM6P62312 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.34■□□□□ 0.85
LSM6P62312 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM6P62312 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.34■□□□□ 0.85
LSM6P62312 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM6P62312 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.34■□□□□ 0.85
LSM6P62312 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
LSM6P62312 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM6P62312 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC20.34■□□□□ 0.85
LSM6P62312 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LSM6P62312 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
LSM6P62312 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LSM6P62312 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
LSM6P62312 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
LSM6P62312 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
LSM6P62312 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LSM6P62312 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LSM6P62312 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
LSM6P62312 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSM6P62312 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
LSM6P62312 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
LSM6P62312 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM6P62312 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
LSM6P62312 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM6P62312 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
LSM6P62312 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM6P62312 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
LSM6P62312 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC20.32■□□□□ 0.84
LSM6P62312 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.32■□□□□ 0.84
LSM6P62312 PVT1_1.1-201ENST00000615125 194 ntBASIC20.32■□□□□ 0.84
LSM6P62312 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.32■□□□□ 0.84
LSM6P62312 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
LSM6P62312 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
LSM6P62312 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.31■□□□□ 0.84
LSM6P62312 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM6P62312 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSM6P62312 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
LSM6P62312 AC010980.1-201ENST00000587192 1142 ntBASIC20.31■□□□□ 0.84
LSM6P62312 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.31■□□□□ 0.84
LSM6P62312 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM6P62312 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
LSM6P62312 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
LSM6P62312 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.31■□□□□ 0.84
LSM6P62312 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.3■□□□□ 0.84
LSM6P62312 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.3■□□□□ 0.84
LSM6P62312 KRT18P24-201ENST00000344739 1156 ntBASIC20.3■□□□□ 0.84
LSM6P62312 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.3■□□□□ 0.84
LSM6P62312 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms