Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC011511.4-201ENST00000586529 1850 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
SEC61A1P61619 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC20.11■□□□□ 0.81
SEC61A1P61619 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
SEC61A1P61619 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEC61A1P61619 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEC61A1P61619 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SEC61A1P61619 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEC61A1P61619 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEC61A1P61619 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
SEC61A1P61619 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SEC61A1P61619 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEC61A1P61619 RARRES2P1-201ENST00000474487 481 ntBASIC20.1■□□□□ 0.81
SEC61A1P61619 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SEC61A1P61619 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
SEC61A1P61619 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A1P61619 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC20.09■□□□□ 0.81
SEC61A1P61619 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A1P61619 EVA1C-203ENST00000401402 1558 ntTSL 5 BASIC20.09■□□□□ 0.81
SEC61A1P61619 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SEC61A1P61619 AC096887.2-201ENST00000623443 1957 ntBASIC20.09■□□□□ 0.81
SEC61A1P61619 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A1P61619 AC139795.1-202ENST00000500444 432 ntBASIC20.09■□□□□ 0.81
SEC61A1P61619 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.09■□□□□ 0.81
SEC61A1P61619 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A1P61619 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A1P61619 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A1P61619 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
SEC61A1P61619 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEC61A1P61619 PVT1-212ENST00000521951 1535 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
SEC61A1P61619 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEC61A1P61619 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SEC61A1P61619 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.08■□□□□ 0.81
SEC61A1P61619 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEC61A1P61619 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
SEC61A1P61619 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC20.08■□□□□ 0.8
SEC61A1P61619 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.08■□□□□ 0.8
SEC61A1P61619 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEC61A1P61619 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.8
SEC61A1P61619 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A1P61619 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.07■□□□□ 0.8
SEC61A1P61619 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A1P61619 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A1P61619 IDNK-203ENST00000405990 629 ntTSL 2 BASIC20.07■□□□□ 0.8
SEC61A1P61619 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A1P61619 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A1P61619 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A1P61619 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A1P61619 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A1P61619 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SEC61A1P61619 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC20.07■□□□□ 0.8
SEC61A1P61619 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEC61A1P61619 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
SEC61A1P61619 LINC01124-201ENST00000409786 2117 ntBASIC20.06■□□□□ 0.8
SEC61A1P61619 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEC61A1P61619 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEC61A1P61619 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC20.06■□□□□ 0.8
SEC61A1P61619 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
SEC61A1P61619 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEC61A1P61619 BEX3-202ENST00000372634 753 ntTSL 2 BASIC20.06■□□□□ 0.8
SEC61A1P61619 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.06■□□□□ 0.8
SEC61A1P61619 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC20.06■□□□□ 0.8
SEC61A1P61619 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
SEC61A1P61619 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.06■□□□□ 0.8
SEC61A1P61619 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC61A1P61619 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
SEC61A1P61619 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
SEC61A1P61619 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.05■□□□□ 0.8
SEC61A1P61619 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC61A1P61619 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
SEC61A1P61619 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
SEC61A1P61619 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC61A1P61619 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
SEC61A1P61619 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A1P61619 KRT8P33-201ENST00000508125 1423 ntBASIC20.04■□□□□ 0.8
SEC61A1P61619 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A1P61619 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A1P61619 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A1P61619 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A1P61619 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC20.04■□□□□ 0.8
SEC61A1P61619 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.04■□□□□ 0.8
SEC61A1P61619 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
SEC61A1P61619 PVT1_1.1-201ENST00000615125 194 ntBASIC20.04■□□□□ 0.8
SEC61A1P61619 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.04■□□□□ 0.8
SEC61A1P61619 DUSP8P5-201ENST00000422884 1815 ntBASIC20.04■□□□□ 0.8
SEC61A1P61619 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A1P61619 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A1P61619 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A1P61619 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
SEC61A1P61619 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A1P61619 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.03■□□□□ 0.8
SEC61A1P61619 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A1P61619 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A1P61619 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A1P61619 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SEC61A1P61619 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC61A1P61619 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
SEC61A1P61619 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.02■□□□□ 0.8
SEC61A1P61619 REEP6-201ENST00000233596 1794 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SEC61A1P61619 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.02■□□□□ 0.8
SEC61A1P61619 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms