Protein–RNA interactions for Protein: P61129

ZC3H6, Zinc finger CCCH domain-containing protein 6, humanhuman

Known RBP Predictions only

Length 1,189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H6P61129 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC31.46■■■□□ 2.63
ZC3H6P61129 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC31.46■■■□□ 2.63
ZC3H6P61129 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC31.46■■■□□ 2.63
ZC3H6P61129 TTBK2-205ENST00000567274 1777 ntTSL 5 BASIC31.45■■■□□ 2.63
ZC3H6P61129 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC31.45■■■□□ 2.63
ZC3H6P61129 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC31.45■■■□□ 2.63
ZC3H6P61129 AC004448.1-201ENST00000458332 883 ntBASIC31.45■■■□□ 2.63
ZC3H6P61129 AC087623.3-201ENST00000607047 1098 ntBASIC31.45■■■□□ 2.63
ZC3H6P61129 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC31.45■■■□□ 2.62
ZC3H6P61129 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC31.45■■■□□ 2.62
ZC3H6P61129 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC31.45■■■□□ 2.62
ZC3H6P61129 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
ZC3H6P61129 MAG-206ENST00000597035 542 ntTSL 4 BASIC31.44■■■□□ 2.62
ZC3H6P61129 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC31.44■■■□□ 2.62
ZC3H6P61129 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC31.44■■■□□ 2.62
ZC3H6P61129 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ZC3H6P61129 AC097381.1-201ENST00000429019 1296 ntBASIC31.43■■■□□ 2.62
ZC3H6P61129 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
ZC3H6P61129 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC31.43■■■□□ 2.62
ZC3H6P61129 AC091305.1-201ENST00000479476 895 ntBASIC31.43■■■□□ 2.62
ZC3H6P61129 MIR4767-201ENST00000582827 78 ntBASIC31.43■■■□□ 2.62
ZC3H6P61129 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC31.43■■■□□ 2.62
ZC3H6P61129 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC31.43■■■□□ 2.62
ZC3H6P61129 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ZC3H6P61129 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC31.42■■■□□ 2.62
ZC3H6P61129 DUX4L19-201ENST00000557448 1267 ntBASIC31.42■■■□□ 2.62
ZC3H6P61129 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
ZC3H6P61129 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC31.42■■■□□ 2.62
ZC3H6P61129 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ZC3H6P61129 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC31.41■■■□□ 2.62
ZC3H6P61129 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.41■■■□□ 2.62
ZC3H6P61129 AC096887.2-201ENST00000623443 1957 ntBASIC31.41■■■□□ 2.62
ZC3H6P61129 AC142086.6-201ENST00000621154 1765 ntBASIC31.41■■■□□ 2.62
ZC3H6P61129 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC31.41■■■□□ 2.62
ZC3H6P61129 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC31.41■■■□□ 2.62
ZC3H6P61129 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC31.4■■■□□ 2.62
ZC3H6P61129 SYT6-210ENST00000641643 1587 ntBASIC31.4■■■□□ 2.62
ZC3H6P61129 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC31.4■■■□□ 2.62
ZC3H6P61129 SF1-220ENST00000626028 704 ntTSL 2 BASIC31.4■■■□□ 2.62
ZC3H6P61129 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC31.4■■■□□ 2.62
ZC3H6P61129 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC31.39■■■□□ 2.62
ZC3H6P61129 AL162430.1-201ENST00000480705 870 ntBASIC31.39■■■□□ 2.62
ZC3H6P61129 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC31.39■■■□□ 2.62
ZC3H6P61129 ERN1-208ENST00000606895 2068 ntBASIC31.39■■■□□ 2.62
ZC3H6P61129 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC31.39■■■□□ 2.61
ZC3H6P61129 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ZC3H6P61129 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC31.38■■■□□ 2.61
ZC3H6P61129 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC31.38■■■□□ 2.61
ZC3H6P61129 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC31.38■■■□□ 2.61
ZC3H6P61129 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ZC3H6P61129 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC31.38■■■□□ 2.61
ZC3H6P61129 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC31.38■■■□□ 2.61
ZC3H6P61129 AC097639.1-201ENST00000565519 1891 ntBASIC31.38■■■□□ 2.61
ZC3H6P61129 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ZC3H6P61129 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ZC3H6P61129 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ZC3H6P61129 CA15P2-201ENST00000611168 834 ntBASIC31.37■■■□□ 2.61
ZC3H6P61129 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC31.37■■■□□ 2.61
ZC3H6P61129 AC005703.6-201ENST00000623265 1329 ntBASIC31.37■■■□□ 2.61
ZC3H6P61129 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC31.37■■■□□ 2.61
ZC3H6P61129 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC31.36■■■□□ 2.61
ZC3H6P61129 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC31.36■■■□□ 2.61
ZC3H6P61129 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC31.36■■■□□ 2.61
ZC3H6P61129 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC31.36■■■□□ 2.61
ZC3H6P61129 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC31.36■■■□□ 2.61
ZC3H6P61129 PTMA-205ENST00000410064 814 ntTSL 2 BASIC31.36■■■□□ 2.61
ZC3H6P61129 PLD4-205ENST00000553861 667 ntTSL 2 BASIC31.36■■■□□ 2.61
ZC3H6P61129 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC31.36■■■□□ 2.61
ZC3H6P61129 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC31.36■■■□□ 2.61
ZC3H6P61129 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC31.35■■■□□ 2.61
ZC3H6P61129 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ZC3H6P61129 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC31.35■■■□□ 2.61
ZC3H6P61129 SERBP1P1-201ENST00000396021 1160 ntBASIC31.35■■■□□ 2.61
ZC3H6P61129 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ZC3H6P61129 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC31.35■■■□□ 2.61
ZC3H6P61129 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC31.34■■■□□ 2.61
ZC3H6P61129 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC31.34■■■□□ 2.61
ZC3H6P61129 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC31.34■■■□□ 2.61
ZC3H6P61129 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ZC3H6P61129 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ZC3H6P61129 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC31.34■■■□□ 2.61
ZC3H6P61129 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC31.34■■■□□ 2.61
ZC3H6P61129 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC31.33■■■□□ 2.61
ZC3H6P61129 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ZC3H6P61129 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC31.33■■■□□ 2.61
ZC3H6P61129 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC31.33■■■□□ 2.61
ZC3H6P61129 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC31.33■■■□□ 2.61
ZC3H6P61129 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC31.32■■■□□ 2.61
ZC3H6P61129 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC31.32■■■□□ 2.6
ZC3H6P61129 RASA4CP-201ENST00000424092 1398 ntBASIC31.32■■■□□ 2.6
ZC3H6P61129 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ZC3H6P61129 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZC3H6P61129 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZC3H6P61129 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZC3H6P61129 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC31.32■■■□□ 2.6
ZC3H6P61129 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC31.32■■■□□ 2.6
ZC3H6P61129 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC31.31■■■□□ 2.6
ZC3H6P61129 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC31.31■■■□□ 2.6
ZC3H6P61129 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC31.31■■■□□ 2.6
ZC3H6P61129 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC31.31■■■□□ 2.6
Retrieved 100 of 98,524 protein–RNA pairs in 18.2 ms