Protein–RNA interactions for Protein: P61006

RAB8A, Ras-related protein Rab-8A, humanhuman

Predictions only

Length 207 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB8AP61006 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB8AP61006 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAB8AP61006 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RAB8AP61006 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.15■■□□□ 1.14
RAB8AP61006 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RAB8AP61006 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RAB8AP61006 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RAB8AP61006 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.14■■□□□ 1.14
RAB8AP61006 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
RAB8AP61006 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.14■■□□□ 1.13
RAB8AP61006 HLA-L-211ENST00000482052 1765 ntBASIC22.14■■□□□ 1.13
RAB8AP61006 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC22.14■■□□□ 1.13
RAB8AP61006 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAB8AP61006 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
RAB8AP61006 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RAB8AP61006 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAB8AP61006 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
RAB8AP61006 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAB8AP61006 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAB8AP61006 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAB8AP61006 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC22.13■■□□□ 1.13
RAB8AP61006 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RAB8AP61006 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RAB8AP61006 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
RAB8AP61006 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAB8AP61006 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RAB8AP61006 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
RAB8AP61006 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC22.12■■□□□ 1.13
RAB8AP61006 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RAB8AP61006 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.12■■□□□ 1.13
RAB8AP61006 TMEM202-AS1-202ENST00000565181 2325 ntBASIC22.12■■□□□ 1.13
RAB8AP61006 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAB8AP61006 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAB8AP61006 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.11■■□□□ 1.13
RAB8AP61006 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAB8AP61006 AL451085.2-201ENST00000605085 799 ntBASIC22.11■■□□□ 1.13
RAB8AP61006 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RAB8AP61006 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RAB8AP61006 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC22.11■■□□□ 1.13
RAB8AP61006 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.11■■□□□ 1.13
RAB8AP61006 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAB8AP61006 AL139125.2-201ENST00000623134 1869 ntBASIC22.1■■□□□ 1.13
RAB8AP61006 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAB8AP61006 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RAB8AP61006 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.1■■□□□ 1.13
RAB8AP61006 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC22.09■■□□□ 1.13
RAB8AP61006 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RAB8AP61006 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RAB8AP61006 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.09■■□□□ 1.13
RAB8AP61006 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
RAB8AP61006 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RAB8AP61006 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
RAB8AP61006 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RAB8AP61006 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.08■■□□□ 1.13
RAB8AP61006 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RAB8AP61006 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.08■■□□□ 1.13
RAB8AP61006 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
RAB8AP61006 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
RAB8AP61006 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC22.08■■□□□ 1.12
RAB8AP61006 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC22.08■■□□□ 1.12
RAB8AP61006 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
RAB8AP61006 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
RAB8AP61006 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RAB8AP61006 EED-207ENST00000528180 1745 ntTSL 5 BASIC22.07■■□□□ 1.12
RAB8AP61006 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAB8AP61006 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RAB8AP61006 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.07■■□□□ 1.12
RAB8AP61006 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.07■■□□□ 1.12
RAB8AP61006 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RAB8AP61006 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
RAB8AP61006 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
RAB8AP61006 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.06■■□□□ 1.12
RAB8AP61006 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.06■■□□□ 1.12
RAB8AP61006 LINC01124-201ENST00000409786 2117 ntBASIC22.06■■□□□ 1.12
RAB8AP61006 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAB8AP61006 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC22.06■■□□□ 1.12
RAB8AP61006 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAB8AP61006 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.06■■□□□ 1.12
RAB8AP61006 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RAB8AP61006 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
RAB8AP61006 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAB8AP61006 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAB8AP61006 RNF146-205ENST00000477776 762 ntTSL 3 BASIC22.05■■□□□ 1.12
RAB8AP61006 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC22.05■■□□□ 1.12
RAB8AP61006 AC009299.2-201ENST00000482477 511 ntBASIC22.05■■□□□ 1.12
RAB8AP61006 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC22.05■■□□□ 1.12
RAB8AP61006 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.05■■□□□ 1.12
RAB8AP61006 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.05■■□□□ 1.12
RAB8AP61006 AF131216.4-201ENST00000638924 1588 ntBASIC22.04■■□□□ 1.12
RAB8AP61006 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RAB8AP61006 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RAB8AP61006 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB8AP61006 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC22.04■■□□□ 1.12
RAB8AP61006 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB8AP61006 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.04■■□□□ 1.12
RAB8AP61006 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
RAB8AP61006 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.04■■□□□ 1.12
RAB8AP61006 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
RAB8AP61006 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RAB8AP61006 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms