Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
CDH12P55289 SHD-204ENST00000599689 1729 ntTSL 5 BASIC21.56■■□□□ 1.04
CDH12P55289 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC21.56■■□□□ 1.04
CDH12P55289 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH12P55289 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
CDH12P55289 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
CDH12P55289 RNF126P1-201ENST00000567452 1320 ntBASIC21.55■■□□□ 1.04
CDH12P55289 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH12P55289 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH12P55289 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH12P55289 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
CDH12P55289 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH12P55289 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC21.55■■□□□ 1.04
CDH12P55289 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
CDH12P55289 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
CDH12P55289 AC009831.1-201ENST00000580420 1582 ntBASIC21.55■■□□□ 1.04
CDH12P55289 HLA-L-211ENST00000482052 1765 ntBASIC21.55■■□□□ 1.04
CDH12P55289 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.55■■□□□ 1.04
CDH12P55289 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH12P55289 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH12P55289 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CDH12P55289 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDH12P55289 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH12P55289 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC21.54■■□□□ 1.04
CDH12P55289 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.54■■□□□ 1.04
CDH12P55289 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.54■■□□□ 1.04
CDH12P55289 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
CDH12P55289 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CDH12P55289 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH12P55289 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CDH12P55289 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH12P55289 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH12P55289 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH12P55289 HES4-204ENST00000484667 667 ntTSL 3 BASIC21.53■■□□□ 1.04
CDH12P55289 AC133552.2-201ENST00000619106 1032 ntBASIC21.53■■□□□ 1.04
CDH12P55289 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
CDH12P55289 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CDH12P55289 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH12P55289 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC21.52■■□□□ 1.04
CDH12P55289 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH12P55289 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CDH12P55289 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH12P55289 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDH12P55289 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH12P55289 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH12P55289 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDH12P55289 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDH12P55289 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.51■■□□□ 1.03
CDH12P55289 KRT18P10-201ENST00000388836 1287 ntBASIC21.5■■□□□ 1.03
CDH12P55289 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH12P55289 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH12P55289 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH12P55289 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH12P55289 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CDH12P55289 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDH12P55289 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDH12P55289 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH12P55289 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDH12P55289 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CDH12P55289 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDH12P55289 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDH12P55289 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CDH12P55289 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH12P55289 ME2-208ENST00000638937 2471 ntTSL 5 BASIC21.48■■□□□ 1.03
CDH12P55289 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH12P55289 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC21.48■■□□□ 1.03
CDH12P55289 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH12P55289 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.48■■□□□ 1.03
CDH12P55289 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDH12P55289 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDH12P55289 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH12P55289 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC21.47■■□□□ 1.03
CDH12P55289 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH12P55289 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH12P55289 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH12P55289 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CDH12P55289 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH12P55289 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDH12P55289 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH12P55289 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDH12P55289 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CDH12P55289 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH12P55289 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH12P55289 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC21.46■■□□□ 1.03
CDH12P55289 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
CDH12P55289 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CDH12P55289 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CDH12P55289 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC21.46■■□□□ 1.03
CDH12P55289 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.45■■□□□ 1.02
CDH12P55289 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH12P55289 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CDH12P55289 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC21.45■■□□□ 1.02
CDH12P55289 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21.45■■□□□ 1.02
CDH12P55289 FOXO3B-201ENST00000395675 1928 ntBASIC21.45■■□□□ 1.02
CDH12P55289 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CDH12P55289 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CDH12P55289 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CDH12P55289 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CDH12P55289 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC21.44■■□□□ 1.02
CDH12P55289 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms