Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.94■■□□□ 1.1
PRIM2P49643 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRIM2P49643 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRIM2P49643 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRIM2P49643 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
PRIM2P49643 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
PRIM2P49643 KRT18P60-201ENST00000312876 1297 ntBASIC21.93■■□□□ 1.1
PRIM2P49643 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRIM2P49643 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRIM2P49643 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRIM2P49643 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRIM2P49643 AC087393.1-201ENST00000582896 145 ntBASIC21.93■■□□□ 1.1
PRIM2P49643 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.93■■□□□ 1.1
PRIM2P49643 AC129492.7-201ENST00000622992 756 ntBASIC21.93■■□□□ 1.1
PRIM2P49643 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PRIM2P49643 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.93■■□□□ 1.1
PRIM2P49643 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRIM2P49643 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRIM2P49643 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRIM2P49643 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.92■■□□□ 1.1
PRIM2P49643 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
PRIM2P49643 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRIM2P49643 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.92■■□□□ 1.1
PRIM2P49643 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PRIM2P49643 NTF6A-201ENST00000591175 560 ntBASIC21.92■■□□□ 1.1
PRIM2P49643 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRIM2P49643 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PRIM2P49643 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRIM2P49643 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRIM2P49643 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC21.91■■□□□ 1.1
PRIM2P49643 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.91■■□□□ 1.1
PRIM2P49643 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
PRIM2P49643 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
PRIM2P49643 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.9■■□□□ 1.1
PRIM2P49643 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.9■■□□□ 1.1
PRIM2P49643 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.9■■□□□ 1.1
PRIM2P49643 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRIM2P49643 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
PRIM2P49643 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRIM2P49643 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
PRIM2P49643 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
PRIM2P49643 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PRIM2P49643 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
PRIM2P49643 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.89■■□□□ 1.09
PRIM2P49643 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.89■■□□□ 1.09
PRIM2P49643 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRIM2P49643 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.09
PRIM2P49643 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRIM2P49643 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC21.88■■□□□ 1.09
PRIM2P49643 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRIM2P49643 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
PRIM2P49643 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.88■■□□□ 1.09
PRIM2P49643 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC21.88■■□□□ 1.09
PRIM2P49643 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRIM2P49643 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
PRIM2P49643 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRIM2P49643 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRIM2P49643 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRIM2P49643 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC21.87■■□□□ 1.09
PRIM2P49643 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21.87■■□□□ 1.09
PRIM2P49643 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC21.87■■□□□ 1.09
PRIM2P49643 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRIM2P49643 AC004812.2-201ENST00000611079 2094 ntBASIC21.87■■□□□ 1.09
PRIM2P49643 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRIM2P49643 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRIM2P49643 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
PRIM2P49643 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
PRIM2P49643 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRIM2P49643 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRIM2P49643 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
PRIM2P49643 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRIM2P49643 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
PRIM2P49643 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
PRIM2P49643 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC21.86■■□□□ 1.09
PRIM2P49643 HLA-L-211ENST00000482052 1765 ntBASIC21.86■■□□□ 1.09
PRIM2P49643 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRIM2P49643 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
PRIM2P49643 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.85■■□□□ 1.09
PRIM2P49643 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
PRIM2P49643 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC21.85■■□□□ 1.09
PRIM2P49643 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRIM2P49643 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRIM2P49643 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
PRIM2P49643 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC21.84■■□□□ 1.09
PRIM2P49643 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRIM2P49643 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
PRIM2P49643 AL592295.1-201ENST00000400984 884 ntBASIC21.84■■□□□ 1.09
PRIM2P49643 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC21.84■■□□□ 1.09
PRIM2P49643 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
PRIM2P49643 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC21.84■■□□□ 1.09
PRIM2P49643 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PRIM2P49643 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRIM2P49643 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.83■■□□□ 1.09
PRIM2P49643 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRIM2P49643 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC21.83■■□□□ 1.09
PRIM2P49643 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRIM2P49643 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PRIM2P49643 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.83■■□□□ 1.08
PRIM2P49643 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PRIM2P49643 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms