Protein–RNA interactions for Protein: P40318

SSM4, ERAD-associated E3 ubiquitin-protein ligase DOA10, yeastyeast

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSM4P40318 POP1YNL221C 2628 nt7.12□□□□□ -1.27
SSM4P40318 YAP1802YGR241C 1707 nt7.11□□□□□ -1.27
SSM4P40318 YDR401WYDR401W 564 nt7.11□□□□□ -1.27
SSM4P40318 SED4YCR067C 3198 nt7.11□□□□□ -1.27
SSM4P40318 YCR075W-AYCR075W-A 228 nt7.1□□□□□ -1.27
SSM4P40318 TRS23YDR246W 660 nt7.1□□□□□ -1.27
SSM4P40318 JAC1YGL018C 555 nt7.1□□□□□ -1.27
SSM4P40318 ARO2YGL148W 1131 nt7.1□□□□□ -1.27
SSM4P40318 MIM2YLR099W-A 264 nt7.1□□□□□ -1.27
SSM4P40318 ATE1YGL017W 1512 nt7.1□□□□□ -1.27
SSM4P40318 PZF1YPR186C 1290 nt7.09□□□□□ -1.27
SSM4P40318 PUS1YPL212C 1635 nt7.09□□□□□ -1.27
SSM4P40318 SLX5YDL013W 1860 nt7.09□□□□□ -1.28
SSM4P40318 SPS22YCL048W 1392 nt7.08□□□□□ -1.28
SSM4P40318 IWR1YDL115C 1062 nt7.08□□□□□ -1.28
SSM4P40318 GTO1YGR154C 1071 nt7.08□□□□□ -1.28
SSM4P40318 YNR042WYNR042W 429 nt7.08□□□□□ -1.28
SSM4P40318 CKB2YOR039W 777 nt7.08□□□□□ -1.28
SSM4P40318 AIM10YER087W 1731 nt7.08□□□□□ -1.28
SSM4P40318 ADE3YGR204W 2841 nt7.07□□□□□ -1.28
SSM4P40318 SLC1YDL052C 912 nt7.07□□□□□ -1.28
SSM4P40318 CWC21YDR482C 408 nt7.07□□□□□ -1.28
SSM4P40318 tX(XXX)DtX(XXX)D 100 nt7.07□□□□□ -1.28
SSM4P40318 PEX22YAL055W 543 nt7.07□□□□□ -1.28
SSM4P40318 MET31YPL038W 534 nt7.07□□□□□ -1.28
SSM4P40318 YHR145CYHR145C 357 nt7.06□□□□□ -1.28
SSM4P40318 APN1YKL114C 1104 nt7.06□□□□□ -1.28
SSM4P40318 MRPL4YLR439W 960 nt7.06□□□□□ -1.28
SSM4P40318 YBR016WYBR016W 387 nt7.06□□□□□ -1.28
SSM4P40318 HXT14YNL318C 1623 nt7.06□□□□□ -1.28
SSM4P40318 YNL296WYNL296W 315 nt7.05□□□□□ -1.28
SSM4P40318 CMK2YOL016C 1344 nt7.05□□□□□ -1.28
SSM4P40318 CHS5YLR330W 2016 nt7.05□□□□□ -1.28
SSM4P40318 CTR3YLR411W 726 nt7.04□□□□□ -1.28
SSM4P40318 YMR245WYMR245W 621 nt7.04□□□□□ -1.28
SSM4P40318 TLG2YOL018C 1194 nt7.04□□□□□ -1.28
SSM4P40318 HST2YPL015C 1074 nt7.04□□□□□ -1.28
SSM4P40318 GPA1YHR005C 1419 nt7.04□□□□□ -1.28
SSM4P40318 NUP116YMR047C 3342 nt7.04□□□□□ -1.28
SSM4P40318 TFC6YDR362C 2019 nt7.04□□□□□ -1.28
SSM4P40318 YMR105W-AYMR105W-A 195 nt7.03□□□□□ -1.28
SSM4P40318 NRD1YNL251C 1728 nt7.03□□□□□ -1.28
SSM4P40318 HGH1YGR187C 1185 nt7.02□□□□□ -1.28
SSM4P40318 MCH4YOL119C 1506 nt7.02□□□□□ -1.29
SSM4P40318 DOA1YKL213C 2148 nt7.02□□□□□ -1.29
SSM4P40318 HES1YOR237W 1305 nt7.02□□□□□ -1.29
SSM4P40318 APS1YLR170C 471 nt7.01□□□□□ -1.29
SSM4P40318 YNL067W-AYNL067W-A 147 nt7.01□□□□□ -1.29
SSM4P40318 RSC6YCR052W 1452 nt7.01□□□□□ -1.29
SSM4P40318 HRR25YPL204W 1485 nt7.01□□□□□ -1.29
SSM4P40318 ENP1YBR247C 1452 nt7.01□□□□□ -1.29
SSM4P40318 COT1YOR316C 1320 nt7.01□□□□□ -1.29
SSM4P40318 MNN2YBR015C 1794 nt7.01□□□□□ -1.29
SSM4P40318 FZF1YGL254W 900 nt7.01□□□□□ -1.29
SSM4P40318 CMR1YDL156W 1569 nt7□□□□□ -1.29
SSM4P40318 ASF2YDL197C 1578 nt7□□□□□ -1.29
SSM4P40318 ROT2YBR229C 2865 nt7□□□□□ -1.29
SSM4P40318 YDR417CYDR417C 372 nt7□□□□□ -1.29
SSM4P40318 NOP16YER002W 696 nt7□□□□□ -1.29
SSM4P40318 TOM20YGR082W 552 nt7□□□□□ -1.29
SSM4P40318 YFL052WYFL052W 1398 nt7□□□□□ -1.29
SSM4P40318 DBP9YLR276C 1785 nt6.99□□□□□ -1.29
SSM4P40318 FAP1YNL023C 2898 nt6.99□□□□□ -1.29
SSM4P40318 OXP1YKL215C 3861 nt6.99□□□□□ -1.29
SSM4P40318 CAB1YDR531W 1104 nt6.99□□□□□ -1.29
SSM4P40318 HSP150YJL159W 1242 nt6.99□□□□□ -1.29
SSM4P40318 SKG1YKR100C 1068 nt6.99□□□□□ -1.29
SSM4P40318 YLR122CYLR122C 378 nt6.99□□□□□ -1.29
SSM4P40318 YNL174WYNL174W 573 nt6.99□□□□□ -1.29
SSM4P40318 NHP6AYPR052C 282 nt6.98□□□□□ -1.29
SSM4P40318 ARO7YPR060C 771 nt6.98□□□□□ -1.29
SSM4P40318 SRV2YNL138W 1581 nt6.97□□□□□ -1.29
SSM4P40318 SPT3YDR392W 1014 nt6.97□□□□□ -1.29
SSM4P40318 YGR127WYGR127W 939 nt6.97□□□□□ -1.29
SSM4P40318 VPS29YHR012W 849 nt6.97□□□□□ -1.29
SSM4P40318 ZPS1YOL154W 750 nt6.97□□□□□ -1.29
SSM4P40318 GMC1YDR506C 1827 nt6.96□□□□□ -1.29
SSM4P40318 NSE5YML023C 1671 nt6.96□□□□□ -1.3
SSM4P40318 AIR2YDL175C 1035 nt6.96□□□□□ -1.3
SSM4P40318 RML2YEL050C 1182 nt6.96□□□□□ -1.3
SSM4P40318 CAB4YGR277C 918 nt6.96□□□□□ -1.3
SSM4P40318 YMR010WYMR010W 1218 nt6.96□□□□□ -1.3
SSM4P40318 HEL1YKR017C 1656 nt6.95□□□□□ -1.3
SSM4P40318 ATG23YLR431C 1362 nt6.95□□□□□ -1.3
SSM4P40318 TRS33YOR115C 807 nt6.95□□□□□ -1.3
SSM4P40318 YPL191CYPL191C 1083 nt6.95□□□□□ -1.3
SSM4P40318 ATM1YMR301C 2073 nt6.95□□□□□ -1.3
SSM4P40318 VPS1YKR001C 2115 nt6.95□□□□□ -1.3
SSM4P40318 UGA1YGR019W 1416 nt6.94□□□□□ -1.3
SSM4P40318 TRM10YOL093W 882 nt6.94□□□□□ -1.3
SSM4P40318 SLD7YOR060C 774 nt6.94□□□□□ -1.3
SSM4P40318 ATG14YBR128C 1035 nt6.94□□□□□ -1.3
SSM4P40318 ASN2YGR124W 1719 nt6.93□□□□□ -1.3
SSM4P40318 OPT1YJL212C 2400 nt6.93□□□□□ -1.3
SSM4P40318 YER187WYER187W 426 nt6.93□□□□□ -1.3
SSM4P40318 TRX2YGR209C 315 nt6.93□□□□□ -1.3
SSM4P40318 YPR169W-AYPR169W-A 219 nt6.93□□□□□ -1.3
SSM4P40318 YPR170W-BYPR170W-B 258 nt6.93□□□□□ -1.3
SSM4P40318 MLF3YNL074C 1359 nt6.92□□□□□ -1.3
SSM4P40318 YDL027CYDL027C 1263 nt6.92□□□□□ -1.3
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms