Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CEBPA-AS1-201ENST00000592982 2198 ntBASIC19.65■□□□□ 0.74
COL8A2P25067 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL8A2P25067 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL8A2P25067 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.64■□□□□ 0.73
COL8A2P25067 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.64■□□□□ 0.73
COL8A2P25067 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL8A2P25067 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL8A2P25067 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
COL8A2P25067 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL8A2P25067 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
COL8A2P25067 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC19.64■□□□□ 0.73
COL8A2P25067 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
COL8A2P25067 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL8A2P25067 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL8A2P25067 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL8A2P25067 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC19.63■□□□□ 0.73
COL8A2P25067 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
COL8A2P25067 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.63■□□□□ 0.73
COL8A2P25067 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.63■□□□□ 0.73
COL8A2P25067 MTDHP2-201ENST00000601468 714 ntBASIC19.63■□□□□ 0.73
COL8A2P25067 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
COL8A2P25067 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL8A2P25067 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL8A2P25067 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
COL8A2P25067 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL8A2P25067 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
COL8A2P25067 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC19.62■□□□□ 0.73
COL8A2P25067 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
COL8A2P25067 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL8A2P25067 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.61■□□□□ 0.73
COL8A2P25067 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.61■□□□□ 0.73
COL8A2P25067 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.61■□□□□ 0.73
COL8A2P25067 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC19.61■□□□□ 0.73
COL8A2P25067 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL8A2P25067 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
COL8A2P25067 AC008406.3-201ENST00000620001 1374 ntBASIC19.6■□□□□ 0.73
COL8A2P25067 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL8A2P25067 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL8A2P25067 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
COL8A2P25067 LBH-205ENST00000407930 756 ntTSL 2 BASIC19.6■□□□□ 0.73
COL8A2P25067 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC19.6■□□□□ 0.73
COL8A2P25067 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC19.6■□□□□ 0.73
COL8A2P25067 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL8A2P25067 MIR6724-1-201ENST00000616420 92 ntBASIC19.59■□□□□ 0.73
COL8A2P25067 MIR6724-2-201ENST00000616483 92 ntBASIC19.59■□□□□ 0.73
COL8A2P25067 MIR6724-4-201ENST00000617390 92 ntBASIC19.59■□□□□ 0.73
COL8A2P25067 MIR6724-3-201ENST00000622482 92 ntBASIC19.59■□□□□ 0.73
COL8A2P25067 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL8A2P25067 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
COL8A2P25067 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL8A2P25067 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC19.58■□□□□ 0.73
COL8A2P25067 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
COL8A2P25067 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
COL8A2P25067 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
COL8A2P25067 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC19.58■□□□□ 0.72
COL8A2P25067 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.58■□□□□ 0.72
COL8A2P25067 EXOG-217ENST00000630638 197 ntTSL 5 BASIC19.58■□□□□ 0.72
COL8A2P25067 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL8A2P25067 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
COL8A2P25067 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL8A2P25067 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC19.57■□□□□ 0.72
COL8A2P25067 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC19.57■□□□□ 0.72
COL8A2P25067 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL8A2P25067 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC19.57■□□□□ 0.72
COL8A2P25067 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
COL8A2P25067 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC19.57■□□□□ 0.72
COL8A2P25067 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL8A2P25067 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
COL8A2P25067 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL8A2P25067 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
COL8A2P25067 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
COL8A2P25067 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
COL8A2P25067 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL8A2P25067 SRR-208ENST00000576848 588 ntTSL 4 BASIC19.56■□□□□ 0.72
COL8A2P25067 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.56■□□□□ 0.72
COL8A2P25067 SNX5-217ENST00000606557 1087 ntBASIC19.56■□□□□ 0.72
COL8A2P25067 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL8A2P25067 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
COL8A2P25067 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.56■□□□□ 0.72
COL8A2P25067 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.56■□□□□ 0.72
COL8A2P25067 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC19.55■□□□□ 0.72
COL8A2P25067 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL8A2P25067 TRIR-202ENST00000588213 841 ntTSL 3 BASIC19.55■□□□□ 0.72
COL8A2P25067 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
COL8A2P25067 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL8A2P25067 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL8A2P25067 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
COL8A2P25067 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL8A2P25067 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC19.54■□□□□ 0.72
COL8A2P25067 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC19.54■□□□□ 0.72
COL8A2P25067 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC19.54■□□□□ 0.72
COL8A2P25067 AL117332.1-201ENST00000622628 974 ntBASIC19.54■□□□□ 0.72
COL8A2P25067 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL8A2P25067 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL8A2P25067 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
COL8A2P25067 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
COL8A2P25067 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC19.53■□□□□ 0.72
COL8A2P25067 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
COL8A2P25067 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC19.53■□□□□ 0.72
COL8A2P25067 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms