Protein–RNA interactions for Protein: P20340

RAB6A, Ras-related protein Rab-6A, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6AP20340 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB6AP20340 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
RAB6AP20340 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC19.87■□□□□ 0.77
RAB6AP20340 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.87■□□□□ 0.77
RAB6AP20340 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB6AP20340 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB6AP20340 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
RAB6AP20340 AC060814.1-201ENST00000554326 538 ntBASIC19.87■□□□□ 0.77
RAB6AP20340 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB6AP20340 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
RAB6AP20340 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC19.87■□□□□ 0.77
RAB6AP20340 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB6AP20340 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB6AP20340 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB6AP20340 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
RAB6AP20340 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC19.86■□□□□ 0.77
RAB6AP20340 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.86■□□□□ 0.77
RAB6AP20340 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RAB6AP20340 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RAB6AP20340 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
RAB6AP20340 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6AP20340 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.85■□□□□ 0.77
RAB6AP20340 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RAB6AP20340 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.85■□□□□ 0.77
RAB6AP20340 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6AP20340 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6AP20340 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RAB6AP20340 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RAB6AP20340 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6AP20340 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6AP20340 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB6AP20340 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6AP20340 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.84■□□□□ 0.77
RAB6AP20340 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6AP20340 KRT18P10-201ENST00000388836 1287 ntBASIC19.84■□□□□ 0.77
RAB6AP20340 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RAB6AP20340 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
RAB6AP20340 FOXO3B-201ENST00000395675 1928 ntBASIC19.84■□□□□ 0.77
RAB6AP20340 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC19.84■□□□□ 0.77
RAB6AP20340 RCCD1-206ENST00000556618 1556 ntAPPRIS P2 TSL 5 BASIC19.83■□□□□ 0.77
RAB6AP20340 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.83■□□□□ 0.77
RAB6AP20340 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RAB6AP20340 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.77
RAB6AP20340 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAB6AP20340 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RAB6AP20340 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.83■□□□□ 0.77
RAB6AP20340 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6AP20340 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6AP20340 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6AP20340 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RAB6AP20340 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6AP20340 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6AP20340 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6AP20340 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RAB6AP20340 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RAB6AP20340 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
RAB6AP20340 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
RAB6AP20340 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6AP20340 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6AP20340 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RAB6AP20340 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6AP20340 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC19.81■□□□□ 0.76
RAB6AP20340 RP9P-202ENST00000450133 1212 ntBASIC19.81■□□□□ 0.76
RAB6AP20340 AC092296.2-201ENST00000589470 999 ntBASIC19.81■□□□□ 0.76
RAB6AP20340 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RAB6AP20340 SLC39A2-201ENST00000298681 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6AP20340 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6AP20340 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
RAB6AP20340 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6AP20340 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RAB6AP20340 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB6AP20340 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
RAB6AP20340 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
RAB6AP20340 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RAB6AP20340 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC19.8■□□□□ 0.76
RAB6AP20340 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
RAB6AP20340 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB6AP20340 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RAB6AP20340 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
RAB6AP20340 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6AP20340 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.79■□□□□ 0.76
RAB6AP20340 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6AP20340 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6AP20340 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RAB6AP20340 C9orf163-202ENST00000624034 2573 ntBASIC19.79■□□□□ 0.76
RAB6AP20340 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RAB6AP20340 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6AP20340 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6AP20340 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6AP20340 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.78■□□□□ 0.76
RAB6AP20340 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB6AP20340 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB6AP20340 AC016575.1-201ENST00000607026 382 ntBASIC19.78■□□□□ 0.76
RAB6AP20340 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6AP20340 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6AP20340 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RAB6AP20340 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB6AP20340 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC19.78■□□□□ 0.76
RAB6AP20340 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC19.77■□□□□ 0.76
RAB6AP20340 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms