Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC23.83■■□□□ 1.41
COL4A2P08572 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
COL4A2P08572 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
COL4A2P08572 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL4A2P08572 AF213884.3-201ENST00000563833 479 ntBASIC23.82■■□□□ 1.4
COL4A2P08572 AC104564.3-201ENST00000582367 638 ntBASIC23.82■■□□□ 1.4
COL4A2P08572 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC23.82■■□□□ 1.4
COL4A2P08572 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL4A2P08572 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
COL4A2P08572 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
COL4A2P08572 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC23.82■■□□□ 1.4
COL4A2P08572 PTMA-205ENST00000410064 814 ntTSL 2 BASIC23.81■■□□□ 1.4
COL4A2P08572 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A2P08572 AC004448.1-201ENST00000458332 883 ntBASIC23.81■■□□□ 1.4
COL4A2P08572 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A2P08572 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC23.81■■□□□ 1.4
COL4A2P08572 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A2P08572 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A2P08572 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
COL4A2P08572 AC131274.2-201ENST00000580697 1507 ntBASIC23.8■■□□□ 1.4
COL4A2P08572 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A2P08572 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC23.8■■□□□ 1.4
COL4A2P08572 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A2P08572 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A2P08572 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A2P08572 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC23.8■■□□□ 1.4
COL4A2P08572 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A2P08572 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A2P08572 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC23.8■■□□□ 1.4
COL4A2P08572 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC23.8■■□□□ 1.4
COL4A2P08572 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A2P08572 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
COL4A2P08572 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
COL4A2P08572 AUH-201ENST00000303617 1490 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL4A2P08572 SRD5A1P1-201ENST00000442297 786 ntBASIC23.79■■□□□ 1.4
COL4A2P08572 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
COL4A2P08572 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC23.79■■□□□ 1.4
COL4A2P08572 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
COL4A2P08572 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC23.79■■□□□ 1.4
COL4A2P08572 AC010501.1-201ENST00000606270 1962 ntBASIC23.79■■□□□ 1.4
COL4A2P08572 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
COL4A2P08572 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
COL4A2P08572 GRAMD4P4-201ENST00000613563 1115 ntBASIC23.79■■□□□ 1.4
COL4A2P08572 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC23.79■■□□□ 1.4
COL4A2P08572 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC23.78■■□□□ 1.4
COL4A2P08572 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL4A2P08572 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
COL4A2P08572 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL4A2P08572 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL4A2P08572 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC23.77■■□□□ 1.4
COL4A2P08572 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC23.77■■□□□ 1.39
COL4A2P08572 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
COL4A2P08572 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC23.76■■□□□ 1.39
COL4A2P08572 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC23.76■■□□□ 1.39
COL4A2P08572 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
COL4A2P08572 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL4A2P08572 AL136967.2-201ENST00000623968 743 ntBASIC23.76■■□□□ 1.39
COL4A2P08572 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL4A2P08572 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL4A2P08572 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL4A2P08572 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
COL4A2P08572 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
COL4A2P08572 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL4A2P08572 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL4A2P08572 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL4A2P08572 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC23.74■■□□□ 1.39
COL4A2P08572 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC23.74■■□□□ 1.39
COL4A2P08572 AL355001.2-201ENST00000620617 1191 ntBASIC23.74■■□□□ 1.39
COL4A2P08572 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL4A2P08572 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL4A2P08572 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL4A2P08572 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.73■■□□□ 1.39
COL4A2P08572 TMEM147-203ENST00000392205 767 ntTSL 2 BASIC23.73■■□□□ 1.39
COL4A2P08572 PTCHD3P2-201ENST00000424937 1205 ntBASIC23.73■■□□□ 1.39
COL4A2P08572 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL4A2P08572 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL4A2P08572 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC23.73■■□□□ 1.39
COL4A2P08572 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL4A2P08572 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC23.73■■□□□ 1.39
COL4A2P08572 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
COL4A2P08572 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL4A2P08572 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
COL4A2P08572 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL4A2P08572 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL4A2P08572 MIR5787-201ENST00000611784 55 ntBASIC23.72■■□□□ 1.39
COL4A2P08572 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL4A2P08572 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL4A2P08572 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL4A2P08572 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
COL4A2P08572 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC23.71■■□□□ 1.39
COL4A2P08572 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
COL4A2P08572 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL4A2P08572 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL4A2P08572 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
COL4A2P08572 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
COL4A2P08572 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
COL4A2P08572 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC23.7■■□□□ 1.39
COL4A2P08572 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC23.7■■□□□ 1.39
COL4A2P08572 DUX4L19-201ENST00000557448 1267 ntBASIC23.7■■□□□ 1.39
COL4A2P08572 AC018413.1-201ENST00000581996 1200 ntTSL 2 BASIC23.7■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms