Protein–RNA interactions for Protein: O75677

RFPL1, Ret finger protein-like 1, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL1O75677 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC23.31■■□□□ 1.32
RFPL1O75677 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
RFPL1O75677 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
RFPL1O75677 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.31■■□□□ 1.32
RFPL1O75677 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFPL1O75677 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFPL1O75677 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RFPL1O75677 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFPL1O75677 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
RFPL1O75677 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC23.3■■□□□ 1.32
RFPL1O75677 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFPL1O75677 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFPL1O75677 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFPL1O75677 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RFPL1O75677 AC093536.1-201ENST00000569153 554 ntBASIC23.3■■□□□ 1.32
RFPL1O75677 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC23.3■■□□□ 1.32
RFPL1O75677 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC23.3■■□□□ 1.32
RFPL1O75677 AC129492.7-201ENST00000622992 756 ntBASIC23.3■■□□□ 1.32
RFPL1O75677 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
RFPL1O75677 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
RFPL1O75677 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
RFPL1O75677 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RFPL1O75677 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFPL1O75677 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
RFPL1O75677 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RFPL1O75677 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
RFPL1O75677 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC23.29■■□□□ 1.32
RFPL1O75677 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC23.29■■□□□ 1.32
RFPL1O75677 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.29■■□□□ 1.32
RFPL1O75677 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
RFPL1O75677 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
RFPL1O75677 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
RFPL1O75677 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
RFPL1O75677 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
RFPL1O75677 AC133552.2-201ENST00000619106 1032 ntBASIC23.28■■□□□ 1.32
RFPL1O75677 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
RFPL1O75677 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFPL1O75677 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC23.27■■□□□ 1.32
RFPL1O75677 AL592293.1-201ENST00000502889 1188 ntBASIC23.27■■□□□ 1.32
RFPL1O75677 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC23.27■■□□□ 1.32
RFPL1O75677 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.27■■□□□ 1.32
RFPL1O75677 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RFPL1O75677 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFPL1O75677 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RFPL1O75677 AC009831.1-201ENST00000580420 1582 ntBASIC23.27■■□□□ 1.32
RFPL1O75677 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC23.26■■□□□ 1.31
RFPL1O75677 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFPL1O75677 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFPL1O75677 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC23.26■■□□□ 1.31
RFPL1O75677 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.26■■□□□ 1.31
RFPL1O75677 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFPL1O75677 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
RFPL1O75677 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RFPL1O75677 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFPL1O75677 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFPL1O75677 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RFPL1O75677 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RFPL1O75677 DUX4L18-201ENST00000553347 1267 ntBASIC23.25■■□□□ 1.31
RFPL1O75677 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFPL1O75677 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RFPL1O75677 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RFPL1O75677 FOXO3B-201ENST00000395675 1928 ntBASIC23.24■■□□□ 1.31
RFPL1O75677 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC23.24■■□□□ 1.31
RFPL1O75677 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFPL1O75677 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC23.24■■□□□ 1.31
RFPL1O75677 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.24■■□□□ 1.31
RFPL1O75677 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RFPL1O75677 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFPL1O75677 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFPL1O75677 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RFPL1O75677 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RFPL1O75677 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RFPL1O75677 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RFPL1O75677 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFPL1O75677 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.22■■□□□ 1.31
RFPL1O75677 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.22■■□□□ 1.31
RFPL1O75677 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFPL1O75677 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
RFPL1O75677 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC23.22■■□□□ 1.31
RFPL1O75677 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
RFPL1O75677 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC23.22■■□□□ 1.31
RFPL1O75677 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFPL1O75677 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
RFPL1O75677 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFPL1O75677 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFPL1O75677 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.21■■□□□ 1.31
RFPL1O75677 RAP2CP1-202ENST00000605179 643 ntBASIC23.21■■□□□ 1.31
RFPL1O75677 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC23.21■■□□□ 1.31
RFPL1O75677 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFPL1O75677 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFPL1O75677 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
RFPL1O75677 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.2■■□□□ 1.3
RFPL1O75677 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFPL1O75677 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC23.2■■□□□ 1.3
RFPL1O75677 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFPL1O75677 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
RFPL1O75677 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFPL1O75677 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
RFPL1O75677 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
RFPL1O75677 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms