Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.03
TRIM3O75382 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC21.52■■□□□ 1.03
TRIM3O75382 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM3O75382 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM3O75382 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC21.51■■□□□ 1.03
TRIM3O75382 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM3O75382 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.51■■□□□ 1.03
TRIM3O75382 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM3O75382 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRIM3O75382 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC21.51■■□□□ 1.03
TRIM3O75382 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM3O75382 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM3O75382 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM3O75382 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM3O75382 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM3O75382 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM3O75382 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM3O75382 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM3O75382 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM3O75382 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM3O75382 TRIR-205ENST00000592273 783 ntTSL 3 BASIC21.49■■□□□ 1.03
TRIM3O75382 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRIM3O75382 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRIM3O75382 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM3O75382 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM3O75382 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM3O75382 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRIM3O75382 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM3O75382 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM3O75382 SSSCA1-AS1-201ENST00000567594 614 ntBASIC21.48■■□□□ 1.03
TRIM3O75382 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM3O75382 AC011551.1-201ENST00000614101 683 ntBASIC21.48■■□□□ 1.03
TRIM3O75382 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM3O75382 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM3O75382 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM3O75382 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM3O75382 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
TRIM3O75382 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM3O75382 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM3O75382 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM3O75382 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM3O75382 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC21.47■■□□□ 1.03
TRIM3O75382 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.47■■□□□ 1.03
TRIM3O75382 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM3O75382 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM3O75382 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM3O75382 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
TRIM3O75382 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM3O75382 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM3O75382 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC21.47■■□□□ 1.03
TRIM3O75382 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM3O75382 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM3O75382 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM3O75382 CEBPA-AS1-201ENST00000592982 2198 ntBASIC21.46■■□□□ 1.03
TRIM3O75382 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM3O75382 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM3O75382 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM3O75382 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC21.45■■□□□ 1.02
TRIM3O75382 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRIM3O75382 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM3O75382 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM3O75382 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
TRIM3O75382 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.45■■□□□ 1.02
TRIM3O75382 AC133561.1-201ENST00000568600 2415 ntBASIC21.45■■□□□ 1.02
TRIM3O75382 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
TRIM3O75382 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM3O75382 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM3O75382 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM3O75382 AC142381.3-201ENST00000568208 1670 ntBASIC21.44■■□□□ 1.02
TRIM3O75382 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM3O75382 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM3O75382 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
TRIM3O75382 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM3O75382 Z92544.1-202ENST00000571933 1220 ntBASIC21.44■■□□□ 1.02
TRIM3O75382 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.44■■□□□ 1.02
TRIM3O75382 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
TRIM3O75382 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.44■■□□□ 1.02
TRIM3O75382 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM3O75382 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM3O75382 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM3O75382 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM3O75382 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.43■■□□□ 1.02
TRIM3O75382 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM3O75382 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.43■■□□□ 1.02
TRIM3O75382 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.43■■□□□ 1.02
TRIM3O75382 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM3O75382 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM3O75382 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM3O75382 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM3O75382 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM3O75382 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM3O75382 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.42■■□□□ 1.02
TRIM3O75382 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM3O75382 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM3O75382 MIR4281-201ENST00000580852 62 ntBASIC21.42■■□□□ 1.02
TRIM3O75382 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM3O75382 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIM3O75382 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
TRIM3O75382 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM3O75382 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms