Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPNE3O75131 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC22.19■■□□□ 1.14
CPNE3O75131 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC22.19■■□□□ 1.14
CPNE3O75131 MIR6724-1-201ENST00000616420 92 ntBASIC22.19■■□□□ 1.14
CPNE3O75131 MIR6724-2-201ENST00000616483 92 ntBASIC22.19■■□□□ 1.14
CPNE3O75131 MIR6724-4-201ENST00000617390 92 ntBASIC22.19■■□□□ 1.14
CPNE3O75131 MIR6724-3-201ENST00000622482 92 ntBASIC22.19■■□□□ 1.14
CPNE3O75131 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPNE3O75131 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.19■■□□□ 1.14
CPNE3O75131 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC22.19■■□□□ 1.14
CPNE3O75131 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC22.19■■□□□ 1.14
CPNE3O75131 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE3O75131 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE3O75131 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC22.18■■□□□ 1.14
CPNE3O75131 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC22.18■■□□□ 1.14
CPNE3O75131 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
CPNE3O75131 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC22.18■■□□□ 1.14
CPNE3O75131 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC22.18■■□□□ 1.14
CPNE3O75131 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CPNE3O75131 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CPNE3O75131 AC091060.1-201ENST00000623524 1766 ntBASIC22.17■■□□□ 1.14
CPNE3O75131 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CPNE3O75131 PEMT-206ENST00000435340 960 ntTSL 5 BASIC22.17■■□□□ 1.14
CPNE3O75131 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC22.17■■□□□ 1.14
CPNE3O75131 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC22.17■■□□□ 1.14
CPNE3O75131 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC22.17■■□□□ 1.14
CPNE3O75131 EXOG-217ENST00000630638 197 ntTSL 5 BASIC22.17■■□□□ 1.14
CPNE3O75131 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
CPNE3O75131 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CPNE3O75131 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
CPNE3O75131 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC22.17■■□□□ 1.14
CPNE3O75131 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
CPNE3O75131 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
CPNE3O75131 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
CPNE3O75131 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPNE3O75131 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
CPNE3O75131 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC22.16■■□□□ 1.14
CPNE3O75131 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPNE3O75131 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPNE3O75131 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC22.16■■□□□ 1.14
CPNE3O75131 CLTA-210ENST00000540080 989 ntTSL 2 BASIC22.16■■□□□ 1.14
CPNE3O75131 SRR-208ENST00000576848 588 ntTSL 4 BASIC22.16■■□□□ 1.14
CPNE3O75131 LSM7-203ENST00000585409 512 ntTSL 2 BASIC22.16■■□□□ 1.14
CPNE3O75131 TRIR-202ENST00000588213 841 ntTSL 3 BASIC22.16■■□□□ 1.14
CPNE3O75131 AL117332.1-201ENST00000622628 974 ntBASIC22.16■■□□□ 1.14
CPNE3O75131 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
CPNE3O75131 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC22.15■■□□□ 1.14
CPNE3O75131 LSM4-201ENST00000252816 986 ntTSL 2 BASIC22.15■■□□□ 1.14
CPNE3O75131 RPP21-222ENST00000433076 577 ntTSL 2 BASIC22.15■■□□□ 1.14
CPNE3O75131 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC22.15■■□□□ 1.14
CPNE3O75131 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC22.15■■□□□ 1.14
CPNE3O75131 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.14
CPNE3O75131 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
CPNE3O75131 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC22.14■■□□□ 1.13
CPNE3O75131 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CPNE3O75131 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CPNE3O75131 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CPNE3O75131 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CPNE3O75131 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC22.14■■□□□ 1.13
CPNE3O75131 AC019069.1-201ENST00000610008 1333 ntBASIC22.13■■□□□ 1.13
CPNE3O75131 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CPNE3O75131 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CPNE3O75131 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC22.13■■□□□ 1.13
CPNE3O75131 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
CPNE3O75131 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CPNE3O75131 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CPNE3O75131 AC131281.2-201ENST00000520478 145 ntBASIC22.12■■□□□ 1.13
CPNE3O75131 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.12■■□□□ 1.13
CPNE3O75131 MIR3621-201ENST00000580529 85 ntBASIC22.12■■□□□ 1.13
CPNE3O75131 AL356740.2-201ENST00000601559 647 ntBASIC22.12■■□□□ 1.13
CPNE3O75131 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC22.12■■□□□ 1.13
CPNE3O75131 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CPNE3O75131 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC22.11■■□□□ 1.13
CPNE3O75131 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE3O75131 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE3O75131 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE3O75131 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC22.11■■□□□ 1.13
CPNE3O75131 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE3O75131 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC22.11■■□□□ 1.13
CPNE3O75131 KRT72-202ENST00000354310 1764 ntTSL 2 BASIC22.11■■□□□ 1.13
CPNE3O75131 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE3O75131 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CPNE3O75131 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPNE3O75131 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPNE3O75131 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CPNE3O75131 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.1■■□□□ 1.13
CPNE3O75131 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CPNE3O75131 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
CPNE3O75131 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC22.1■■□□□ 1.13
CPNE3O75131 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.1■■□□□ 1.13
CPNE3O75131 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE3O75131 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.09■■□□□ 1.13
CPNE3O75131 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC22.09■■□□□ 1.13
CPNE3O75131 CD72-202ENST00000378430 585 ntTSL 3 BASIC22.09■■□□□ 1.13
CPNE3O75131 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC22.09■■□□□ 1.13
CPNE3O75131 AK3-203ENST00000447596 705 ntTSL 2 BASIC22.09■■□□□ 1.13
CPNE3O75131 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
CPNE3O75131 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC22.09■■□□□ 1.13
CPNE3O75131 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.09■■□□□ 1.13
CPNE3O75131 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 13.1 ms