Protein–RNA interactions for Protein: O43734

TRAF3IP2, Adapter protein CIKS, humanhuman

Predicted RBP Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2O43734 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP2O43734 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP2O43734 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP2O43734 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRAF3IP2O43734 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP2O43734 LINC00543-201ENST00000567234 1845 ntBASIC20.72■□□□□ 0.91
TRAF3IP2O43734 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP2O43734 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC20.72■□□□□ 0.91
TRAF3IP2O43734 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP2O43734 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TRAF3IP2O43734 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP2O43734 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
TRAF3IP2O43734 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP2O43734 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP2O43734 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC20.71■□□□□ 0.91
TRAF3IP2O43734 AC120024.1-201ENST00000562672 995 ntBASIC20.71■□□□□ 0.91
TRAF3IP2O43734 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC20.71■□□□□ 0.91
TRAF3IP2O43734 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP2O43734 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
TRAF3IP2O43734 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP2O43734 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
TRAF3IP2O43734 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
TRAF3IP2O43734 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP2O43734 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAF3IP2O43734 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
TRAF3IP2O43734 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAF3IP2O43734 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC20.7■□□□□ 0.9
TRAF3IP2O43734 AC141586.4-201ENST00000624558 1573 ntBASIC20.7■□□□□ 0.9
TRAF3IP2O43734 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAF3IP2O43734 KRT8P33-201ENST00000508125 1423 ntBASIC20.7■□□□□ 0.9
TRAF3IP2O43734 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
TRAF3IP2O43734 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF3IP2O43734 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP2O43734 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF3IP2O43734 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP2O43734 KRT18P24-201ENST00000344739 1156 ntBASIC20.69■□□□□ 0.9
TRAF3IP2O43734 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.69■□□□□ 0.9
TRAF3IP2O43734 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP2O43734 GAK-223ENST00000628912 497 ntTSL 5 BASIC20.69■□□□□ 0.9
TRAF3IP2O43734 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAF3IP2O43734 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAF3IP2O43734 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP2O43734 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP2O43734 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP2O43734 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAF3IP2O43734 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP2O43734 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP2O43734 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP2O43734 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.67■□□□□ 0.9
TRAF3IP2O43734 THA1P-201ENST00000590384 1145 ntBASIC20.67■□□□□ 0.9
TRAF3IP2O43734 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP2O43734 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP2O43734 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP2O43734 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAF3IP2O43734 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP2O43734 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRAF3IP2O43734 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAF3IP2O43734 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
TRAF3IP2O43734 YBX1P4-201ENST00000392794 808 ntBASIC20.66■□□□□ 0.9
TRAF3IP2O43734 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAF3IP2O43734 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAF3IP2O43734 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAF3IP2O43734 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP2O43734 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
TRAF3IP2O43734 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP2O43734 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP2O43734 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP2O43734 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP2O43734 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP2O43734 AC103724.3-201ENST00000564481 992 ntBASIC20.65■□□□□ 0.9
TRAF3IP2O43734 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
TRAF3IP2O43734 MIR4281-201ENST00000580852 62 ntBASIC20.65■□□□□ 0.9
TRAF3IP2O43734 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
TRAF3IP2O43734 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC20.65■□□□□ 0.9
TRAF3IP2O43734 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAF3IP2O43734 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAF3IP2O43734 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.9
TRAF3IP2O43734 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
TRAF3IP2O43734 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC20.64■□□□□ 0.89
TRAF3IP2O43734 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAF3IP2O43734 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
TRAF3IP2O43734 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
TRAF3IP2O43734 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC20.64■□□□□ 0.89
TRAF3IP2O43734 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP2O43734 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
TRAF3IP2O43734 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP2O43734 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP2O43734 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP2O43734 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
TRAF3IP2O43734 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
TRAF3IP2O43734 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP2O43734 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP2O43734 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP2O43734 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP2O43734 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
TRAF3IP2O43734 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.62■□□□□ 0.89
TRAF3IP2O43734 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP2O43734 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP2O43734 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
TRAF3IP2O43734 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms