Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.05■□□□□ 0.96
RNF13O43567 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RNF13O43567 KRT18P60-201ENST00000312876 1297 ntBASIC21.05■□□□□ 0.96
RNF13O43567 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC21.05■□□□□ 0.96
RNF13O43567 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF13O43567 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF13O43567 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.05■□□□□ 0.96
RNF13O43567 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RNF13O43567 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF13O43567 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF13O43567 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
RNF13O43567 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC21.04■□□□□ 0.96
RNF13O43567 AC087393.1-201ENST00000582896 145 ntBASIC21.04■□□□□ 0.96
RNF13O43567 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF13O43567 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF13O43567 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF13O43567 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RNF13O43567 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.04■□□□□ 0.96
RNF13O43567 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
RNF13O43567 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RNF13O43567 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
RNF13O43567 AC068473.5-201ENST00000616428 2072 ntBASIC21.03■□□□□ 0.96
RNF13O43567 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF13O43567 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF13O43567 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.03■□□□□ 0.96
RNF13O43567 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF13O43567 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF13O43567 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF13O43567 NTF6A-201ENST00000591175 560 ntBASIC21.03■□□□□ 0.96
RNF13O43567 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF13O43567 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC21.03■□□□□ 0.96
RNF13O43567 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF13O43567 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RNF13O43567 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RNF13O43567 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF13O43567 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF13O43567 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF13O43567 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC21.02■□□□□ 0.96
RNF13O43567 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF13O43567 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF13O43567 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
RNF13O43567 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF13O43567 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RNF13O43567 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
RNF13O43567 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
RNF13O43567 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF13O43567 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
RNF13O43567 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.01■□□□□ 0.95
RNF13O43567 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF13O43567 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
RNF13O43567 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
RNF13O43567 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF13O43567 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF13O43567 TTC9-201ENST00000256367 5217 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF13O43567 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF13O43567 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF13O43567 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC21■□□□□ 0.95
RNF13O43567 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF13O43567 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC21■□□□□ 0.95
RNF13O43567 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RNF13O43567 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC21■□□□□ 0.95
RNF13O43567 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
RNF13O43567 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF13O43567 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF13O43567 AC141586.4-201ENST00000624558 1573 ntBASIC20.99■□□□□ 0.95
RNF13O43567 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.99■□□□□ 0.95
RNF13O43567 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
RNF13O43567 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC20.99■□□□□ 0.95
RNF13O43567 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF13O43567 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF13O43567 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF13O43567 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RNF13O43567 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
RNF13O43567 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF13O43567 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RNF13O43567 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RNF13O43567 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.98■□□□□ 0.95
RNF13O43567 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF13O43567 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF13O43567 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF13O43567 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RNF13O43567 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC20.98■□□□□ 0.95
RNF13O43567 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF13O43567 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.97■□□□□ 0.95
RNF13O43567 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF13O43567 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC20.97■□□□□ 0.95
RNF13O43567 DUX4L18-201ENST00000553347 1267 ntBASIC20.97■□□□□ 0.95
RNF13O43567 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RNF13O43567 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF13O43567 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF13O43567 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF13O43567 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RNF13O43567 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF13O43567 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF13O43567 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.96■□□□□ 0.95
RNF13O43567 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF13O43567 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
RNF13O43567 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RNF13O43567 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
RNF13O43567 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms