Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC20.1■□□□□ 0.81
XRCC2O43543 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.1■□□□□ 0.81
XRCC2O43543 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.1■□□□□ 0.81
XRCC2O43543 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.1■□□□□ 0.81
XRCC2O43543 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 TSPY13P-201ENST00000338964 914 ntBASIC20.1■□□□□ 0.81
XRCC2O43543 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.1■□□□□ 0.81
XRCC2O43543 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
XRCC2O43543 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
XRCC2O43543 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC20.09■□□□□ 0.81
XRCC2O43543 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC20.09■□□□□ 0.81
XRCC2O43543 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
XRCC2O43543 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
XRCC2O43543 AC011551.1-201ENST00000614101 683 ntBASIC20.09■□□□□ 0.81
XRCC2O43543 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
XRCC2O43543 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
XRCC2O43543 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
XRCC2O43543 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.08■□□□□ 0.81
XRCC2O43543 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
XRCC2O43543 TMEM202-AS1-202ENST00000565181 2325 ntBASIC20.08■□□□□ 0.81
XRCC2O43543 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
XRCC2O43543 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC20.08■□□□□ 0.81
XRCC2O43543 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
XRCC2O43543 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
XRCC2O43543 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC20.07■□□□□ 0.8
XRCC2O43543 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
XRCC2O43543 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
XRCC2O43543 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
XRCC2O43543 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
XRCC2O43543 AC012354.3-201ENST00000623734 483 ntBASIC20.07■□□□□ 0.8
XRCC2O43543 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
XRCC2O43543 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.07■□□□□ 0.8
XRCC2O43543 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
XRCC2O43543 CYP4V2-201ENST00000378802 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
XRCC2O43543 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
XRCC2O43543 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
XRCC2O43543 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
XRCC2O43543 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
XRCC2O43543 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
XRCC2O43543 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.06■□□□□ 0.8
XRCC2O43543 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
XRCC2O43543 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC20.06■□□□□ 0.8
XRCC2O43543 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
XRCC2O43543 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC20.06■□□□□ 0.8
XRCC2O43543 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
XRCC2O43543 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
XRCC2O43543 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
XRCC2O43543 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
XRCC2O43543 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
XRCC2O43543 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC20.05■□□□□ 0.8
XRCC2O43543 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
XRCC2O43543 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
XRCC2O43543 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
XRCC2O43543 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
XRCC2O43543 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
XRCC2O43543 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.04■□□□□ 0.8
XRCC2O43543 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC2O43543 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC2O43543 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC2O43543 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC2O43543 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC2O43543 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
XRCC2O43543 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC20.04■□□□□ 0.8
XRCC2O43543 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC2O43543 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC2O43543 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC2O43543 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
XRCC2O43543 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC2O43543 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
XRCC2O43543 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC2O43543 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC2O43543 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC2O43543 IDNK-201ENST00000376417 511 ntTSL 5 BASIC20.03■□□□□ 0.8
XRCC2O43543 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC2O43543 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.03■□□□□ 0.8
XRCC2O43543 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
XRCC2O43543 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC2O43543 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
XRCC2O43543 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC2O43543 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC2O43543 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC2O43543 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.02■□□□□ 0.8
XRCC2O43543 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.02■□□□□ 0.8
XRCC2O43543 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC20.02■□□□□ 0.8
XRCC2O43543 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.02■□□□□ 0.8
XRCC2O43543 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.02■□□□□ 0.8
XRCC2O43543 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
XRCC2O43543 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
XRCC2O43543 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
XRCC2O43543 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.02■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms