Protein–RNA interactions for Protein: O43490

PROM1, Prominin-1, humanhuman

Predictions only

Length 865 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1O43490 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC22.04■■□□□ 1.12
PROM1O43490 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
PROM1O43490 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
PROM1O43490 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC22.03■■□□□ 1.12
PROM1O43490 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
PROM1O43490 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC22.03■■□□□ 1.12
PROM1O43490 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
PROM1O43490 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PROM1O43490 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC22.03■■□□□ 1.12
PROM1O43490 HLA-L-211ENST00000482052 1765 ntBASIC22.02■■□□□ 1.12
PROM1O43490 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.02■■□□□ 1.12
PROM1O43490 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PROM1O43490 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC22.02■■□□□ 1.12
PROM1O43490 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
PROM1O43490 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PROM1O43490 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.02■■□□□ 1.11
PROM1O43490 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PROM1O43490 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PROM1O43490 KRT18P24-201ENST00000344739 1156 ntBASIC22.01■■□□□ 1.11
PROM1O43490 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
PROM1O43490 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC22.01■■□□□ 1.11
PROM1O43490 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC22.01■■□□□ 1.11
PROM1O43490 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.01■■□□□ 1.11
PROM1O43490 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PROM1O43490 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.01■■□□□ 1.11
PROM1O43490 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
PROM1O43490 PREB-202ENST00000406567 1910 ntTSL 5 BASIC22■■□□□ 1.11
PROM1O43490 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC22■■□□□ 1.11
PROM1O43490 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PROM1O43490 AC120024.1-201ENST00000562672 995 ntBASIC22■■□□□ 1.11
PROM1O43490 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PROM1O43490 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
PROM1O43490 LINC01124-201ENST00000409786 2117 ntBASIC22■■□□□ 1.11
PROM1O43490 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC21.99■■□□□ 1.11
PROM1O43490 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PROM1O43490 KRT8P33-201ENST00000508125 1423 ntBASIC21.99■■□□□ 1.11
PROM1O43490 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC21.99■■□□□ 1.11
PROM1O43490 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PROM1O43490 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC21.99■■□□□ 1.11
PROM1O43490 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.99■■□□□ 1.11
PROM1O43490 TMEM202-AS1-202ENST00000565181 2325 ntBASIC21.98■■□□□ 1.11
PROM1O43490 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PROM1O43490 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PROM1O43490 YBX1P4-201ENST00000392794 808 ntBASIC21.98■■□□□ 1.11
PROM1O43490 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC21.98■■□□□ 1.11
PROM1O43490 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PROM1O43490 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC21.98■■□□□ 1.11
PROM1O43490 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PROM1O43490 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PROM1O43490 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.97■■□□□ 1.11
PROM1O43490 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
PROM1O43490 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PROM1O43490 GAK-223ENST00000628912 497 ntTSL 5 BASIC21.97■■□□□ 1.11
PROM1O43490 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PROM1O43490 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PROM1O43490 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
PROM1O43490 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
PROM1O43490 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC21.97■■□□□ 1.11
PROM1O43490 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC21.96■■□□□ 1.11
PROM1O43490 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.96■■□□□ 1.11
PROM1O43490 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.96■■□□□ 1.11
PROM1O43490 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PROM1O43490 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
PROM1O43490 THA1P-201ENST00000590384 1145 ntBASIC21.96■■□□□ 1.11
PROM1O43490 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC21.96■■□□□ 1.11
PROM1O43490 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
PROM1O43490 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.11
PROM1O43490 LINC00543-201ENST00000567234 1845 ntBASIC21.95■■□□□ 1.1
PROM1O43490 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC21.95■■□□□ 1.1
PROM1O43490 AC103724.3-201ENST00000564481 992 ntBASIC21.95■■□□□ 1.1
PROM1O43490 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
PROM1O43490 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.1
PROM1O43490 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
PROM1O43490 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
PROM1O43490 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC21.95■■□□□ 1.1
PROM1O43490 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.94■■□□□ 1.1
PROM1O43490 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PROM1O43490 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC21.94■■□□□ 1.1
PROM1O43490 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.94■■□□□ 1.1
PROM1O43490 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
PROM1O43490 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC21.94■■□□□ 1.1
PROM1O43490 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
PROM1O43490 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC21.94■■□□□ 1.1
PROM1O43490 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PROM1O43490 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PROM1O43490 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.93■■□□□ 1.1
PROM1O43490 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PROM1O43490 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.93■■□□□ 1.1
PROM1O43490 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC21.93■■□□□ 1.1
PROM1O43490 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC21.93■■□□□ 1.1
PROM1O43490 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PROM1O43490 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PROM1O43490 AC141586.4-201ENST00000624558 1573 ntBASIC21.92■■□□□ 1.1
PROM1O43490 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
PROM1O43490 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
PROM1O43490 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.92■■□□□ 1.1
PROM1O43490 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC21.92■■□□□ 1.1
PROM1O43490 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC21.92■■□□□ 1.1
PROM1O43490 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC21.92■■□□□ 1.1
PROM1O43490 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms