Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM4A7MD48 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SRRM4A7MD48 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.69■□□□□ 0.58
SRRM4A7MD48 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM4A7MD48 AC090877.2-201ENST00000558441 1738 ntBASIC18.69■□□□□ 0.58
SRRM4A7MD48 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SRRM4A7MD48 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
SRRM4A7MD48 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM4A7MD48 DUX4L18-201ENST00000553347 1267 ntBASIC18.68■□□□□ 0.58
SRRM4A7MD48 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC18.68■□□□□ 0.58
SRRM4A7MD48 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM4A7MD48 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC18.68■□□□□ 0.58
SRRM4A7MD48 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM4A7MD48 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.68■□□□□ 0.58
SRRM4A7MD48 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SRRM4A7MD48 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC18.68■□□□□ 0.58
SRRM4A7MD48 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SRRM4A7MD48 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM4A7MD48 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.67■□□□□ 0.58
SRRM4A7MD48 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC18.67■□□□□ 0.58
SRRM4A7MD48 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SRRM4A7MD48 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM4A7MD48 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SRRM4A7MD48 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM4A7MD48 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.67■□□□□ 0.58
SRRM4A7MD48 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SRRM4A7MD48 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM4A7MD48 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM4A7MD48 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
SRRM4A7MD48 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SRRM4A7MD48 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC18.66■□□□□ 0.58
SRRM4A7MD48 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.66■□□□□ 0.58
SRRM4A7MD48 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM4A7MD48 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SRRM4A7MD48 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SRRM4A7MD48 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.65■□□□□ 0.58
SRRM4A7MD48 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SRRM4A7MD48 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.64■□□□□ 0.58
SRRM4A7MD48 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM4A7MD48 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM4A7MD48 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SRRM4A7MD48 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.64■□□□□ 0.57
SRRM4A7MD48 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM4A7MD48 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.64■□□□□ 0.57
SRRM4A7MD48 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.64■□□□□ 0.57
SRRM4A7MD48 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.64■□□□□ 0.57
SRRM4A7MD48 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.64■□□□□ 0.57
SRRM4A7MD48 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
SRRM4A7MD48 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM4A7MD48 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SRRM4A7MD48 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SRRM4A7MD48 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SRRM4A7MD48 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC18.63■□□□□ 0.57
SRRM4A7MD48 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM4A7MD48 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
SRRM4A7MD48 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM4A7MD48 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM4A7MD48 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM4A7MD48 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM4A7MD48 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM4A7MD48 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM4A7MD48 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.63■□□□□ 0.57
SRRM4A7MD48 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM4A7MD48 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM4A7MD48 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM4A7MD48 CASK-201ENST00000378154 2494 ntTSL 5 BASIC18.63■□□□□ 0.57
SRRM4A7MD48 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SRRM4A7MD48 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SRRM4A7MD48 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
SRRM4A7MD48 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM4A7MD48 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM4A7MD48 HYI-210ENST00000486909 905 ntTSL 5 BASIC18.62■□□□□ 0.57
SRRM4A7MD48 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM4A7MD48 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM4A7MD48 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM4A7MD48 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM4A7MD48 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SRRM4A7MD48 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM4A7MD48 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM4A7MD48 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC18.61■□□□□ 0.57
SRRM4A7MD48 RARA-203ENST00000394086 2008 ntTSL 2 BASIC18.61■□□□□ 0.57
SRRM4A7MD48 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM4A7MD48 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM4A7MD48 AC004987.1-201ENST00000428627 508 ntBASIC18.61■□□□□ 0.57
SRRM4A7MD48 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.61■□□□□ 0.57
SRRM4A7MD48 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM4A7MD48 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM4A7MD48 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SRRM4A7MD48 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
SRRM4A7MD48 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM4A7MD48 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SRRM4A7MD48 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM4A7MD48 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM4A7MD48 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM4A7MD48 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM4A7MD48 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SRRM4A7MD48 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM4A7MD48 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SRRM4A7MD48 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SRRM4A7MD48 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms