Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
SHISA3A0PJX4 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHISA3A0PJX4 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
SHISA3A0PJX4 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHISA3A0PJX4 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHISA3A0PJX4 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
SHISA3A0PJX4 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHISA3A0PJX4 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
SHISA3A0PJX4 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHISA3A0PJX4 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
SHISA3A0PJX4 HES6-205ENST00000409356 528 ntTSL 2 BASIC20.32■□□□□ 0.84
SHISA3A0PJX4 DUX4L11-201ENST00000611504 1267 ntBASIC20.32■□□□□ 0.84
SHISA3A0PJX4 DUX4L12-201ENST00000614593 1267 ntBASIC20.32■□□□□ 0.84
SHISA3A0PJX4 DUX4L14-201ENST00000621227 1267 ntBASIC20.32■□□□□ 0.84
SHISA3A0PJX4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC20.32■□□□□ 0.84
SHISA3A0PJX4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
SHISA3A0PJX4 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHISA3A0PJX4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA3A0PJX4 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA3A0PJX4 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA3A0PJX4 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA3A0PJX4 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
SHISA3A0PJX4 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHISA3A0PJX4 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA3A0PJX4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA3A0PJX4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC20.3■□□□□ 0.84
SHISA3A0PJX4 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA3A0PJX4 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SHISA3A0PJX4 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA3A0PJX4 TERT-206ENST00000508104 2486 ntTSL 5 BASIC20.3■□□□□ 0.84
SHISA3A0PJX4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.3■□□□□ 0.84
SHISA3A0PJX4 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA3A0PJX4 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHISA3A0PJX4 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA3A0PJX4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA3A0PJX4 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHISA3A0PJX4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.29■□□□□ 0.84
SHISA3A0PJX4 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SHISA3A0PJX4 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA3A0PJX4 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA3A0PJX4 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA3A0PJX4 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA3A0PJX4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.28■□□□□ 0.84
SHISA3A0PJX4 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.28■□□□□ 0.84
SHISA3A0PJX4 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA3A0PJX4 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA3A0PJX4 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA3A0PJX4 C1orf229-201ENST00000623686 2258 ntBASIC20.28■□□□□ 0.84
SHISA3A0PJX4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHISA3A0PJX4 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA3A0PJX4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA3A0PJX4 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SHISA3A0PJX4 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA3A0PJX4 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC20.27■□□□□ 0.84
SHISA3A0PJX4 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
SHISA3A0PJX4 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
SHISA3A0PJX4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA3A0PJX4 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
SHISA3A0PJX4 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.27■□□□□ 0.84
SHISA3A0PJX4 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.26■□□□□ 0.83
SHISA3A0PJX4 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 AC126177.7-201ENST00000547904 679 ntBASIC20.25■□□□□ 0.83
SHISA3A0PJX4 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SHISA3A0PJX4 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
SHISA3A0PJX4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHISA3A0PJX4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHISA3A0PJX4 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SHISA3A0PJX4 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.24■□□□□ 0.83
SHISA3A0PJX4 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHISA3A0PJX4 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.24■□□□□ 0.83
SHISA3A0PJX4 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SHISA3A0PJX4 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SHISA3A0PJX4 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.24■□□□□ 0.83
SHISA3A0PJX4 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.23■□□□□ 0.83
SHISA3A0PJX4 ANOS2P-203ENST00000472227 1816 ntBASIC20.23■□□□□ 0.83
SHISA3A0PJX4 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SHISA3A0PJX4 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms