Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 HES4-204ENST00000484667 667 ntTSL 3 BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC23.4■■□□□ 1.34
TCRBV9S1A1TA0A576 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC23.39■■□□□ 1.34
TCRBV9S1A1TA0A576 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TCRBV9S1A1TA0A576 ME2-208ENST00000638937 2471 ntTSL 5 BASIC23.39■■□□□ 1.34
TCRBV9S1A1TA0A576 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
TCRBV9S1A1TA0A576 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
TCRBV9S1A1TA0A576 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC23.39■■□□□ 1.33
TCRBV9S1A1TA0A576 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.39■■□□□ 1.33
TCRBV9S1A1TA0A576 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
TCRBV9S1A1TA0A576 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC23.39■■□□□ 1.33
TCRBV9S1A1TA0A576 AC009831.1-201ENST00000580420 1582 ntBASIC23.39■■□□□ 1.33
TCRBV9S1A1TA0A576 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.39■■□□□ 1.33
TCRBV9S1A1TA0A576 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TCRBV9S1A1TA0A576 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.38■■□□□ 1.33
TCRBV9S1A1TA0A576 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
TCRBV9S1A1TA0A576 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TCRBV9S1A1TA0A576 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
TCRBV9S1A1TA0A576 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC23.38■■□□□ 1.33
TCRBV9S1A1TA0A576 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
TCRBV9S1A1TA0A576 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TCRBV9S1A1TA0A576 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TCRBV9S1A1TA0A576 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TCRBV9S1A1TA0A576 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TCRBV9S1A1TA0A576 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TCRBV9S1A1TA0A576 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TCRBV9S1A1TA0A576 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TCRBV9S1A1TA0A576 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TCRBV9S1A1TA0A576 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TCRBV9S1A1TA0A576 KISS1R-201ENST00000234371 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
TCRBV9S1A1TA0A576 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
TCRBV9S1A1TA0A576 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TCRBV9S1A1TA0A576 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC23.36■■□□□ 1.33
TCRBV9S1A1TA0A576 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC23.36■■□□□ 1.33
TCRBV9S1A1TA0A576 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
TCRBV9S1A1TA0A576 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TCRBV9S1A1TA0A576 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TCRBV9S1A1TA0A576 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC23.35■■□□□ 1.33
TCRBV9S1A1TA0A576 NFE2L3P1-201ENST00000588207 1959 ntBASIC23.35■■□□□ 1.33
TCRBV9S1A1TA0A576 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
TCRBV9S1A1TA0A576 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
TCRBV9S1A1TA0A576 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TCRBV9S1A1TA0A576 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
TCRBV9S1A1TA0A576 C9orf163-202ENST00000624034 2573 ntBASIC23.34■■□□□ 1.33
TCRBV9S1A1TA0A576 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
TCRBV9S1A1TA0A576 AC133552.2-201ENST00000619106 1032 ntBASIC23.34■■□□□ 1.33
TCRBV9S1A1TA0A576 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
TCRBV9S1A1TA0A576 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV9S1A1TA0A576 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV9S1A1TA0A576 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV9S1A1TA0A576 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.33■■□□□ 1.33
TCRBV9S1A1TA0A576 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
TCRBV9S1A1TA0A576 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.32
TCRBV9S1A1TA0A576 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
TCRBV9S1A1TA0A576 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
TCRBV9S1A1TA0A576 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
TCRBV9S1A1TA0A576 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TCRBV9S1A1TA0A576 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC23.32■■□□□ 1.32
TCRBV9S1A1TA0A576 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC23.32■■□□□ 1.32
TCRBV9S1A1TA0A576 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
TCRBV9S1A1TA0A576 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC23.32■■□□□ 1.32
TCRBV9S1A1TA0A576 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
TCRBV9S1A1TA0A576 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.32■■□□□ 1.32
TCRBV9S1A1TA0A576 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC23.31■■□□□ 1.32
TCRBV9S1A1TA0A576 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.31■■□□□ 1.32
TCRBV9S1A1TA0A576 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC23.31■■□□□ 1.32
TCRBV9S1A1TA0A576 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
TCRBV9S1A1TA0A576 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC23.31■■□□□ 1.32
TCRBV9S1A1TA0A576 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TCRBV9S1A1TA0A576 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TCRBV9S1A1TA0A576 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
TCRBV9S1A1TA0A576 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
TCRBV9S1A1TA0A576 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.3■■□□□ 1.32
TCRBV9S1A1TA0A576 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
TCRBV9S1A1TA0A576 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 12.3 ms