Protein–RNA interactions for Protein: A0A1W2PPF3

DUXB, Double homeobox B, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUXBA0A1W2PPF3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
DUXBA0A1W2PPF3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
DUXBA0A1W2PPF3 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
DUXBA0A1W2PPF3 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
DUXBA0A1W2PPF3 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.92■□□□□ 0.62
DUXBA0A1W2PPF3 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
DUXBA0A1W2PPF3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
DUXBA0A1W2PPF3 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DUXBA0A1W2PPF3 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DUXBA0A1W2PPF3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DUXBA0A1W2PPF3 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.91■□□□□ 0.62
DUXBA0A1W2PPF3 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
DUXBA0A1W2PPF3 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
DUXBA0A1W2PPF3 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DUXBA0A1W2PPF3 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DUXBA0A1W2PPF3 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DUXBA0A1W2PPF3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC18.9■□□□□ 0.62
DUXBA0A1W2PPF3 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DUXBA0A1W2PPF3 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC18.9■□□□□ 0.62
DUXBA0A1W2PPF3 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
DUXBA0A1W2PPF3 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DUXBA0A1W2PPF3 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DUXBA0A1W2PPF3 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
DUXBA0A1W2PPF3 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
DUXBA0A1W2PPF3 C9orf163-202ENST00000624034 2573 ntBASIC18.89■□□□□ 0.62
DUXBA0A1W2PPF3 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.62
DUXBA0A1W2PPF3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 KRT18P10-201ENST00000388836 1287 ntBASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 AL157400.5-201ENST00000507624 621 ntBASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
DUXBA0A1W2PPF3 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 CLDN5-201ENST00000403084 2357 ntBASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
DUXBA0A1W2PPF3 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DUXBA0A1W2PPF3 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DUXBA0A1W2PPF3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.87■□□□□ 0.61
DUXBA0A1W2PPF3 FOXO3B-201ENST00000395675 1928 ntBASIC18.87■□□□□ 0.61
DUXBA0A1W2PPF3 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC18.87■□□□□ 0.61
DUXBA0A1W2PPF3 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DUXBA0A1W2PPF3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC18.87■□□□□ 0.61
DUXBA0A1W2PPF3 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
DUXBA0A1W2PPF3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.87■□□□□ 0.61
DUXBA0A1W2PPF3 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
DUXBA0A1W2PPF3 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 AKT1S1-204ENST00000391832 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
DUXBA0A1W2PPF3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUXBA0A1W2PPF3 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
DUXBA0A1W2PPF3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUXBA0A1W2PPF3 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
DUXBA0A1W2PPF3 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUXBA0A1W2PPF3 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
DUXBA0A1W2PPF3 AC233723.2-201ENST00000623798 2106 ntBASIC18.85■□□□□ 0.61
DUXBA0A1W2PPF3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.85■□□□□ 0.61
DUXBA0A1W2PPF3 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 PTX3-201ENST00000295927 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.84■□□□□ 0.61
DUXBA0A1W2PPF3 SMPD5-203ENST00000639008 1464 ntBASIC18.84■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms