Protein–RNA interactions for Protein: A0A0B4J264

TRAV38-1, T-cell receptor alpha variable 38-1 (Fragment), humanhuman

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV38-1A0A0B4J264 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 PRTG-204ENST00000561292 833 ntTSL 3 BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 MIR4281-201ENST00000580852 62 ntBASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.54■□□□□ 0.72
TRAV38-1A0A0B4J264 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV38-1A0A0B4J264 AC093323.1-202ENST00000635031 2045 ntBASIC19.53■□□□□ 0.72
TRAV38-1A0A0B4J264 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC19.53■□□□□ 0.72
TRAV38-1A0A0B4J264 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAV38-1A0A0B4J264 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
TRAV38-1A0A0B4J264 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC19.53■□□□□ 0.72
TRAV38-1A0A0B4J264 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC19.53■□□□□ 0.72
TRAV38-1A0A0B4J264 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 AL451085.2-201ENST00000605085 799 ntBASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC19.52■□□□□ 0.72
TRAV38-1A0A0B4J264 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV38-1A0A0B4J264 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.71
TRAV38-1A0A0B4J264 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV38-1A0A0B4J264 RNF146-205ENST00000477776 762 ntTSL 3 BASIC19.51■□□□□ 0.71
TRAV38-1A0A0B4J264 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
TRAV38-1A0A0B4J264 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV38-1A0A0B4J264 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC19.51■□□□□ 0.71
TRAV38-1A0A0B4J264 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC19.5■□□□□ 0.71
TRAV38-1A0A0B4J264 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV38-1A0A0B4J264 BX664725.1-201ENST00000438252 379 ntBASIC19.5■□□□□ 0.71
TRAV38-1A0A0B4J264 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
TRAV38-1A0A0B4J264 AC009299.2-201ENST00000482477 511 ntBASIC19.5■□□□□ 0.71
TRAV38-1A0A0B4J264 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV38-1A0A0B4J264 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV38-1A0A0B4J264 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
TRAV38-1A0A0B4J264 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
TRAV38-1A0A0B4J264 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC19.5■□□□□ 0.71
TRAV38-1A0A0B4J264 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
TRAV38-1A0A0B4J264 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC19.49■□□□□ 0.71
TRAV38-1A0A0B4J264 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV38-1A0A0B4J264 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV38-1A0A0B4J264 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV38-1A0A0B4J264 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV38-1A0A0B4J264 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV38-1A0A0B4J264 AC137630.3-201ENST00000607245 391 ntBASIC19.49■□□□□ 0.71
TRAV38-1A0A0B4J264 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
TRAV38-1A0A0B4J264 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
TRAV38-1A0A0B4J264 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 MED17-227ENST00000640521 2047 ntTSL 5 BASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 Z92544.1-202ENST00000571933 1220 ntBASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
TRAV38-1A0A0B4J264 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
TRAV38-1A0A0B4J264 KRT125P-201ENST00000546827 989 ntBASIC19.47■□□□□ 0.71
TRAV38-1A0A0B4J264 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC19.47■□□□□ 0.71
TRAV38-1A0A0B4J264 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC19.47■□□□□ 0.71
TRAV38-1A0A0B4J264 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
TRAV38-1A0A0B4J264 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV38-1A0A0B4J264 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC19.47■□□□□ 0.71
TRAV38-1A0A0B4J264 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV38-1A0A0B4J264 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
TRAV38-1A0A0B4J264 AC138932.3-201ENST00000567634 1902 ntBASIC19.47■□□□□ 0.71
TRAV38-1A0A0B4J264 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV38-1A0A0B4J264 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV38-1A0A0B4J264 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
TRAV38-1A0A0B4J264 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC19.46■□□□□ 0.71
TRAV38-1A0A0B4J264 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.46■□□□□ 0.71
TRAV38-1A0A0B4J264 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV38-1A0A0B4J264 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV38-1A0A0B4J264 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC19.45■□□□□ 0.7
TRAV38-1A0A0B4J264 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC19.45■□□□□ 0.7
TRAV38-1A0A0B4J264 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV38-1A0A0B4J264 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV38-1A0A0B4J264 AL035685.1-201ENST00000636663 812 ntBASIC19.45■□□□□ 0.7
TRAV38-1A0A0B4J264 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC19.45■□□□□ 0.7
TRAV38-1A0A0B4J264 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV38-1A0A0B4J264 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
TRAV38-1A0A0B4J264 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV38-1A0A0B4J264 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.44■□□□□ 0.7
TRAV38-1A0A0B4J264 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV38-1A0A0B4J264 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV38-1A0A0B4J264 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
TRAV38-1A0A0B4J264 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms