Protein–RNA interactions for Protein: A0A0B4J246

TRAV8-4, T-cell receptor alpha variable 8-4 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-4A0A0B4J246 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC16.13■□□□□ 0.17
TRAV8-4A0A0B4J246 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
TRAV8-4A0A0B4J246 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
TRAV8-4A0A0B4J246 CDK2AP1-201ENST00000261692 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-4A0A0B4J246 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-4A0A0B4J246 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-4A0A0B4J246 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-4A0A0B4J246 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-4A0A0B4J246 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-4A0A0B4J246 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV8-4A0A0B4J246 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
TRAV8-4A0A0B4J246 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
TRAV8-4A0A0B4J246 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
TRAV8-4A0A0B4J246 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-4A0A0B4J246 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-4A0A0B4J246 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-4A0A0B4J246 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC16.11■□□□□ 0.17
TRAV8-4A0A0B4J246 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-4A0A0B4J246 AC093536.1-201ENST00000569153 554 ntBASIC16.11■□□□□ 0.17
TRAV8-4A0A0B4J246 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
TRAV8-4A0A0B4J246 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC16.11■□□□□ 0.17
TRAV8-4A0A0B4J246 CEBPA-AS1-201ENST00000592982 2198 ntBASIC16.11■□□□□ 0.17
TRAV8-4A0A0B4J246 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
TRAV8-4A0A0B4J246 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
TRAV8-4A0A0B4J246 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
TRAV8-4A0A0B4J246 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-4A0A0B4J246 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-4A0A0B4J246 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC16.1■□□□□ 0.17
TRAV8-4A0A0B4J246 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC16.1■□□□□ 0.17
TRAV8-4A0A0B4J246 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-4A0A0B4J246 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.1■□□□□ 0.17
TRAV8-4A0A0B4J246 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
TRAV8-4A0A0B4J246 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
TRAV8-4A0A0B4J246 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
TRAV8-4A0A0B4J246 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
TRAV8-4A0A0B4J246 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-4A0A0B4J246 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-4A0A0B4J246 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC16.08■□□□□ 0.16
TRAV8-4A0A0B4J246 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-4A0A0B4J246 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
TRAV8-4A0A0B4J246 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 AC142381.3-201ENST00000568208 1670 ntBASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC16.07■□□□□ 0.16
TRAV8-4A0A0B4J246 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 RNF126P1-201ENST00000567452 1320 ntBASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 HES4-204ENST00000484667 667 ntTSL 3 BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
TRAV8-4A0A0B4J246 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 ABHD17AP3-201ENST00000503096 1137 ntBASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
TRAV8-4A0A0B4J246 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC16.04■□□□□ 0.16
TRAV8-4A0A0B4J246 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms