Protein–RNA interactions for Protein: A0A0B4J234

TRAV2, T-cell receptor alpha variable 2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV2A0A0B4J234 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
TRAV2A0A0B4J234 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 THA1P-201ENST00000590384 1145 ntBASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
TRAV2A0A0B4J234 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 AC120024.1-201ENST00000562672 995 ntBASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 GAK-223ENST00000628912 497 ntTSL 5 BASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 AC141586.4-201ENST00000624558 1573 ntBASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
TRAV2A0A0B4J234 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV2A0A0B4J234 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV2A0A0B4J234 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV2A0A0B4J234 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV2A0A0B4J234 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV2A0A0B4J234 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV2A0A0B4J234 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV2A0A0B4J234 AL161729.1-201ENST00000604104 1402 ntBASIC17.46■□□□□ 0.39
TRAV2A0A0B4J234 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TRAV2A0A0B4J234 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV2A0A0B4J234 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV2A0A0B4J234 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TRAV2A0A0B4J234 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV2A0A0B4J234 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV2A0A0B4J234 AC103834.1-201ENST00000520383 144 ntBASIC17.45■□□□□ 0.38
TRAV2A0A0B4J234 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC17.45■□□□□ 0.38
TRAV2A0A0B4J234 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TRAV2A0A0B4J234 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC17.45■□□□□ 0.38
TRAV2A0A0B4J234 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC17.45■□□□□ 0.38
TRAV2A0A0B4J234 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TRAV2A0A0B4J234 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV2A0A0B4J234 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV2A0A0B4J234 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV2A0A0B4J234 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV2A0A0B4J234 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC17.44■□□□□ 0.38
TRAV2A0A0B4J234 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV2A0A0B4J234 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV2A0A0B4J234 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TRAV2A0A0B4J234 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV2A0A0B4J234 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.44■□□□□ 0.38
TRAV2A0A0B4J234 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC17.43■□□□□ 0.38
TRAV2A0A0B4J234 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAV2A0A0B4J234 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.43■□□□□ 0.38
TRAV2A0A0B4J234 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TRAV2A0A0B4J234 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.43■□□□□ 0.38
TRAV2A0A0B4J234 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TRAV2A0A0B4J234 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV2A0A0B4J234 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV2A0A0B4J234 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV2A0A0B4J234 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV2A0A0B4J234 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TRAV2A0A0B4J234 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV2A0A0B4J234 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV2A0A0B4J234 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV2A0A0B4J234 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC17.42■□□□□ 0.38
TRAV2A0A0B4J234 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV2A0A0B4J234 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV2A0A0B4J234 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
TRAV2A0A0B4J234 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.42■□□□□ 0.38
TRAV2A0A0B4J234 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
TRAV2A0A0B4J234 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
TRAV2A0A0B4J234 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV2A0A0B4J234 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV2A0A0B4J234 AC103724.3-201ENST00000564481 992 ntBASIC17.41■□□□□ 0.38
TRAV2A0A0B4J234 MIR4281-201ENST00000580852 62 ntBASIC17.41■□□□□ 0.38
TRAV2A0A0B4J234 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV2A0A0B4J234 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV2A0A0B4J234 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV2A0A0B4J234 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TRAV2A0A0B4J234 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.41■□□□□ 0.38
TRAV2A0A0B4J234 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TRAV2A0A0B4J234 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms