Protein–RNA interactions for Protein: A0A0B4J1U6

TRBV9, T-cell receptor beta variable 9 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV9A0A0B4J1U6 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 LONRF2P2-201ENST00000439212 571 ntBASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 AC138932.3-201ENST00000567634 1902 ntBASIC18.41■□□□□ 0.54
TRBV9A0A0B4J1U6 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 TSPY13P-201ENST00000338964 914 ntBASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 DUX4L18-201ENST00000553347 1267 ntBASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
TRBV9A0A0B4J1U6 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRBV9A0A0B4J1U6 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC18.39■□□□□ 0.54
TRBV9A0A0B4J1U6 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC18.39■□□□□ 0.53
TRBV9A0A0B4J1U6 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV9A0A0B4J1U6 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV9A0A0B4J1U6 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV9A0A0B4J1U6 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.39■□□□□ 0.53
TRBV9A0A0B4J1U6 AC019171.1-201ENST00000601251 1056 ntBASIC18.39■□□□□ 0.53
TRBV9A0A0B4J1U6 MIR6089-201ENST00000616698 64 ntBASIC18.39■□□□□ 0.53
TRBV9A0A0B4J1U6 AC012354.3-201ENST00000623734 483 ntBASIC18.39■□□□□ 0.53
TRBV9A0A0B4J1U6 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV9A0A0B4J1U6 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV9A0A0B4J1U6 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRBV9A0A0B4J1U6 AP003733.4-201ENST00000623785 1697 ntBASIC18.38■□□□□ 0.53
TRBV9A0A0B4J1U6 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV9A0A0B4J1U6 CLDN5-201ENST00000403084 2357 ntBASIC18.38■□□□□ 0.53
TRBV9A0A0B4J1U6 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV9A0A0B4J1U6 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV9A0A0B4J1U6 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV9A0A0B4J1U6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV9A0A0B4J1U6 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV9A0A0B4J1U6 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV9A0A0B4J1U6 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRBV9A0A0B4J1U6 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV9A0A0B4J1U6 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV9A0A0B4J1U6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRBV9A0A0B4J1U6 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
TRBV9A0A0B4J1U6 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV9A0A0B4J1U6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV9A0A0B4J1U6 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV9A0A0B4J1U6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRBV9A0A0B4J1U6 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV9A0A0B4J1U6 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV9A0A0B4J1U6 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV9A0A0B4J1U6 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV9A0A0B4J1U6 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV9A0A0B4J1U6 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV9A0A0B4J1U6 MTX2-204ENST00000443241 799 ntTSL 3 BASIC18.36■□□□□ 0.53
TRBV9A0A0B4J1U6 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC18.36■□□□□ 0.53
TRBV9A0A0B4J1U6 AC139795.1-202ENST00000500444 432 ntBASIC18.36■□□□□ 0.53
TRBV9A0A0B4J1U6 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRBV9A0A0B4J1U6 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC18.36■□□□□ 0.53
TRBV9A0A0B4J1U6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 AL592295.1-201ENST00000400984 884 ntBASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 AC074183.2-201ENST00000623112 922 ntBASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC18.35■□□□□ 0.53
TRBV9A0A0B4J1U6 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV9A0A0B4J1U6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC18.34■□□□□ 0.53
TRBV9A0A0B4J1U6 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV9A0A0B4J1U6 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV9A0A0B4J1U6 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC18.34■□□□□ 0.53
TRBV9A0A0B4J1U6 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV9A0A0B4J1U6 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRBV9A0A0B4J1U6 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV9A0A0B4J1U6 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRBV9A0A0B4J1U6 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms