Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 AC215219.1-201ENST00000400706 1817 ntBASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 NAGK-202ENST00000418807 2343 ntTSL 5 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 TSC22D1-203ENST00000458659 4820 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 LSINCT5-201ENST00000626215 2647 ntBASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 ANKRD52-201ENST00000267116 8688 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
LINC01558Q9Y6Z2 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 MTUS1-204ENST00000381869 6256 ntTSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 AC010969.2-201ENST00000602458 3231 ntBASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 EIF4G1-205ENST00000382330 5129 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 CT62-203ENST00000566432 2822 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 WBP1L-202ENST00000448841 4085 ntAPPRIS ALT1 TSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 CYP4F11-201ENST00000248041 2977 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 KRT19P1-201ENST00000405746 1186 ntBASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 AC111152.3-201ENST00000569699 673 ntBASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 AC004264.1-201ENST00000608354 794 ntBASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 AC020765.3-201ENST00000613051 740 ntBASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 VPS72-207ENST00000640458 689 ntTSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 TPR-201ENST00000367478 9708 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 AC092139.4-201ENST00000624318 2794 ntBASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 C2-209ENST00000452323 1999 ntTSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 BCL2L11-217ENST00000610735 5120 ntTSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 PLEKHA2-207ENST00000616834 3594 ntTSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 ZFYVE27-205ENST00000370613 2669 ntTSL 2 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 DMBT1-201ENST00000330163 5802 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 DMBT1-206ENST00000368956 5802 ntTSL 5 BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC7.95□□□□□ -1.14
LINC01558Q9Y6Z2 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC7.95□□□□□ -1.14
Retrieved 100 of 98,524 protein–RNA pairs in 51.3 ms