Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC14.27□□□□□ -0.12
ERGIC3Q9Y282 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
ERGIC3Q9Y282 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 HMGA1P7-201ENST00000406908 502 ntBASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 DUSP5P1-201ENST00000441325 1139 ntBASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 KRT18P34-201ENST00000488218 1270 ntBASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 KRT18P35-201ENST00000510488 1269 ntBASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 AC008667.4-201ENST00000607370 168 ntBASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 AL139385.1-201ENST00000611744 3272 ntBASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 CAP2-209ENST00000616440 2776 ntTSL 2 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 DHX16-202ENST00000376442 3445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
ERGIC3Q9Y282 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 AL589702.1-201ENST00000641229 1509 ntBASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 SRP54-202ENST00000546080 2187 ntTSL 2 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 RNF146-204ENST00000476956 884 ntTSL 2 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 NDUFS7-202ENST00000313408 2818 ntTSL 2 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 NLRP13-201ENST00000342929 3132 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
ERGIC3Q9Y282 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.9 ms