Protein–RNA interactions for Protein: Q9XRX5

HHLA3, HERV-H LTR-associating protein 3, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HHLA3Q9XRX5 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 DCTN1-203ENST00000409240 4365 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
HHLA3Q9XRX5 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AC107918.4-201ENST00000641966 3141 ntBASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 IL17RD-203ENST00000463523 2348 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 PTMS-202ENST00000389462 773 ntTSL 2 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 RPSAP43-201ENST00000402237 625 ntBASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 GPX1P2-201ENST00000429271 606 ntBASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 ADH5P3-201ENST00000433842 1137 ntBASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AP000842.3-202ENST00000569238 1080 ntBASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AC105339.1-204ENST00000636249 355 ntBASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 C18orf15-201ENST00000623680 2534 ntBASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 GOLGA2P9-201ENST00000596977 1937 ntBASIC11.45□□□□□ -0.58
HHLA3Q9XRX5 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
HHLA3Q9XRX5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 48.2 ms