Protein–RNA interactions for Protein: Q9UPV9

TRAK1, Trafficking kinesin-binding protein 1, humanhuman

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1Q9UPV9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
TRAK1Q9UPV9 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAK1Q9UPV9 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAK1Q9UPV9 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAK1Q9UPV9 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
TRAK1Q9UPV9 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAK1Q9UPV9 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAK1Q9UPV9 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
TRAK1Q9UPV9 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
TRAK1Q9UPV9 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 RNF41-210ENST00000552244 716 ntTSL 3 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 AC004466.1-201ENST00000599515 1080 ntBASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 AL645728.2-202ENST00000641679 227 ntBASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
TRAK1Q9UPV9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 MIR663B-201ENST00000408361 115 ntBASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 TISP43-201ENST00000409793 538 ntTSL 4 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 HSPB1P2-201ENST00000448722 546 ntBASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 COX5BP1-201ENST00000507622 393 ntBASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 KC6-205ENST00000599934 556 ntTSL 4 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 REXO1L5P-201ENST00000622260 2098 ntBASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRAK1Q9UPV9 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 MDH2-205ENST00000461263 648 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 AL391280.1-201ENST00000506969 1062 ntBASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 ACTG1P17-201ENST00000558391 1119 ntBASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 OR10B1P-201ENST00000601666 907 ntBASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 AC073413.1-201ENST00000603927 732 ntBASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC21.48■■□□□ 1.03
TRAK1Q9UPV9 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms