Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 BNIP3P1-202ENST00000550043 1585 ntBASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.39□□□□□ -0.11
NPIPA1Q9UND3 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 GRN-214ENST00000589265 1632 ntTSL 5 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 AL162727.3-201ENST00000635661 2787 ntBASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 AC234783.1-201ENST00000441761 496 ntBASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 IL32-235ENST00000613483 1033 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NPIPA1Q9UND3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 HLA-V-201ENST00000429037 534 ntBASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC14.37□□□□□ -0.11
NPIPA1Q9UND3 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC14.36□□□□□ -0.11
NPIPA1Q9UND3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 61.8 ms