Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
UPF3BQ9BZI7 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 FDPS-202ENST00000368356 1431 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 SYNGR2-207ENST00000590201 2239 ntTSL 5 BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 AC063926.2-201ENST00000623766 1308 ntBASIC18.58■□□□□ 0.57
UPF3BQ9BZI7 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 HNRNPFP1-201ENST00000391730 1133 ntBASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 PNKD-204ENST00000436005 978 ntTSL 5 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 AF228730.6-201ENST00000641497 218 ntBASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 AL033527.5-202ENST00000641632 1098 ntBASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 AC084121.3-201ENST00000641716 218 ntBASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
UPF3BQ9BZI7 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 TSEN15P1-201ENST00000423257 515 ntBASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 AL512361.1-201ENST00000554200 418 ntBASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 AC138761.1-201ENST00000584393 385 ntBASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 AJ011931.1-201ENST00000618749 2492 ntBASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
UPF3BQ9BZI7 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
UPF3BQ9BZI7 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms