Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 REXO1L5P-201ENST00000622260 2098 ntBASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 TNRC18P3-201ENST00000441896 2691 ntBASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 BLK-205ENST00000529894 2017 ntTSL 5 BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
PCDH11YQ9BZA8 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 FKBP4P6-201ENST00000457486 1332 ntBASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 OSM-202ENST00000403389 1000 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 RPS2P36-201ENST00000456516 831 ntBASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 MIR4783-201ENST00000580343 82 ntBASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 AL162426.1-201ENST00000624141 743 ntBASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 AC004923.1-202ENST00000642106 209 ntBASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
PCDH11YQ9BZA8 AC024909.3-201ENST00000611513 2257 ntBASIC19.83■□□□□ 0.76
PCDH11YQ9BZA8 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH11YQ9BZA8 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH11YQ9BZA8 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH11YQ9BZA8 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH11YQ9BZA8 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH11YQ9BZA8 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
PCDH11YQ9BZA8 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 MIR33B-201ENST00000385104 96 ntBASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 MARK2P5-201ENST00000507649 634 ntBASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 MIR3907-201ENST00000579424 151 ntBASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 AC009955.4-201ENST00000597192 544 ntBASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 AC008763.1-201ENST00000601797 843 ntTSL 3 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 AC004899.1-201ENST00000424687 1714 ntBASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
PCDH11YQ9BZA8 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
PCDH11YQ9BZA8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH11YQ9BZA8 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH11YQ9BZA8 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.81■□□□□ 0.76
PCDH11YQ9BZA8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH11YQ9BZA8 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH11YQ9BZA8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
PCDH11YQ9BZA8 SLC16A6P1-201ENST00000413214 1059 ntBASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms